iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-042654

Ensembl Protein ID

GLYMA10G34380.1

UniProt Accession

I1LCP4; I1LCP4_SOYBN

Genbank Protein ID

KRH34700.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100787360; GLYMA_10G200200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G34380	GLYMA10G34380.1	GLYMA10G34380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-07	32.8	209	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++ v +++f  d  +l+s s Dg+ ++W + +gv+l
   Q: 209  NS-VQDMDFsLDsEFLASTSTDGSARIWKTEDGVPL 243
           45.8888999555******************99986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLSFSSLTFL FKICRRIQFS DLRRAPFVAL QLEKRSELAI WVSNFRTLSM GNDAGSPQGP 60
VTCGSWIRRP ENLNLVVLGR SRRGSSCPSL LEIFSFDPKT TSLSTSPLTT YVLEAEEGDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTATTTT TATTCAGATG CTCTCATTTT CGTCTCTGAC ATTTCTATTT AAAATTTGCC 60
GAAGAATCCA ATTCAGCGAT CTCCGAAGAG CTCCATTTGT TGCACTCCAA TTGGAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

gmx:100787360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002477	Amborella trichopoda	62.96	2.00e-136	478.00
IUUC-Bdi-014908	Brachypodium distachyon	56.29	5.00e-111	394.00
IUUC-Cel-018480	Caenorhabditis elegans	27.10	6.00e-09	55.50
IUUC-Oin-079600	Oryza indica	57.59	3.00e-129	454.00
IUUC-Oni-082430	Oryza nivara	55.99	5.00e-98	350.00
IUUC-Opu-083902	Oryza punctata	57.47	8.00e-116	409.00
IUUC-Oru-084937	Oryza rufipogon	57.53	8.00e-98	350.00
IUUC-Osa-085881	Oryza sativa	57.59	3.00e-129	454.00
IUUC-Pop-099736	Populus trichocarpa	72.94	2.00e-170	591.00
IUUC-Sly-110920	Solanum lycopersicum	66.75	2.00e-137	481.00
IUUC-Stu-112065	Solanum tuberosum	66.49	1.00e-137	482.00
IUUC-Tsy-119116	Tarsius syrichta	25.19	3.00e-08	52.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence