iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114320

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G018300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g001970	Sb03g001970.1	Sb03g001970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.4	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl   ++g   ++lp C H+fha C+ +w       + + +CP+Cr
   Q: 110  CAVCLGAVEEGetARSLPgCAHAFHARCVDAW------LRLRPTCPVCR 152
           ******9966555899999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPAATGCDIV GAGTATFAVV CEYDDRFGVV LELVAFSAFV LLLRYAAALY ANHRIATLSA 60
HDDLPPPPAA RSDGASSSGL DDAAIARLPC FVVVVSRGAG AAAAATATEC AVCLGAVEEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCGG CCACCGGATG CGACATCGTC GGCGCGGGAA CGGCCACCTT CGCCGTCGTC 60
TGCGAGTACG ACGATCGCTT CGGCGTGGTC CTCGAGCTCG TCGCGTTCTC CGCCTTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g001970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001108	Aegilops tauschii	58.46	8.00e-29	118.00
IUUC-Hvu-047131	Hordeum vulgare	58.14	2.00e-29	120.00
IUUC-Ogu-077994	Oryza glumaepatula	57.46	7.00e-14	68.90
IUUC-Oin-079925	Oryza indica	57.46	7.00e-14	68.90
IUUC-Oni-082629	Oryza nivara	56.62	2.00e-20	92.00
IUUC-Sit-110331	Setaria italica	60.76	1.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence