iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005502

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_911810

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_603867.1	scaffold_603867.1	scaffold_603867.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	2.70e-11	44.4	339	391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 95   eegpdaglldrlpeeilveilklldkee.llraarvcrrwqelasqkalwktv 146
            ++ +  ++ +lp e+  +il++l + + l +a++vcr+w+++++++++w+++
   Q: 339  VKDEEVRNWAELPPELTSSILGRLGTIDiLENAQKVCRSWRRVCKDPSMWRKI 391
           4566778899**************6666599**********99999****986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEDGDYRNWA ELPAELTSSI LLRLGVVEIL ENAQKVCRSW RRVCKDPSMW RKIVIDNSGN 60
RDIFKYDLDS MCRHAVDRSQ GGLLEIDIEY FGTDKLLDYI ADRFSLSLFS ISSNLRSLRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTCTTGTC TTTACCTCCG GCGATGGAGG ACGGAGATTA TAGAAACTGG GCTGAGCTTC 60
CAGCAGAACT GACGTCATCG ATCCTTCTCC GACTTGGCGT GGTTGAGATA CTCGAAAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

aly:ARALYDRAFT_911810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014562	Brachypodium distachyon	44.19	1.00e-41	163.00
IUUC-Bol-015639	Brassica oleracea	62.96	3.00e-88	317.00
IUUC-Bra-016940	Brassica rapa	63.94	1.00e-92	332.00
IUUC-Gma-042978	Glycine max	27.75	1.00e-08	53.10
IUUC-Lpe-051562	Leersia perrieri	35.26	5.00e-68	253.00
IUUC-Ogl-077479	Oryza glaberrima	40.71	4.00e-39	154.00
IUUC-Ogu-078535	Oryza glumaepatula	35.98	7.00e-38	151.00
IUUC-Oin-079411	Oryza indica	40.32	2.00e-38	152.00
IUUC-Ome-081759	Oryza meridionalis	42.75	2.00e-41	163.00
IUUC-Oni-082766	Oryza nivara	29.80	8.00e-42	165.00
IUUC-Oru-084990	Oryza rufipogon	45.10	5.00e-47	182.00
IUUC-Osa-085658	Oryza sativa	40.32	2.00e-38	152.00
IUUC-Ppe-101358	Prunus persica	46.62	6.00e-62	229.00
IUUC-Sbi-114314	Sorghum bicolor	39.78	2.00e-44	172.00
IUUC-Tca-120963	Theobroma cacao	46.04	1.00e-140	492.00
IUUC-Tae-125315	Triticum aestivum	35.23	1.00e-31	129.00
IUUC-Tur-126585	Triticum urartu	38.27	7.00e-20	90.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence