iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006337

Ensembl Protein ID

fgenesh2_kg.2__430__AT1G60190.1

UniProt Accession

D7KXB5; D7KXB5_ARALL

Genbank Protein ID

EFH64406.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_475300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__430__AT1G60190.1	fgenesh2_kg.2__430__AT1G60190.1	fgenesh2_kg.2__430__AT1G60190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.80e-29	100.4	280	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++++CpIsle+M+dPvvl++G+tydrssI kw+asg+ tcP+t+++l +++lv+n +++++iq++c++n++
   Q: 280  DDLRCPISLEIMSDPVVLETGHTYDRSSITKWFASGNITCPKTGKTLVSTMLVDNFSVKQVIQSYCKQNGV 350
           689*****************************************************************985 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MIHTQTGSNR RILTFPAVNP CESIAITTLV DSLLQLAGEI LSFKPKDFST NKRSVKETLR 60
HIQSLVIFFE ELRIQIRVGS ISASRSAILS LSELHVIFQK LKFLLEDCTR EGAKLYMLMN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCATA CACAAACCGG CTCGAATCGT CGGATTCTGA CCTTTCCGGC GGTGAATCCA 60
TGCGAATCAA TCGCCATAAC CACTCTCGTC GACTCACTAT TACAACTCGC CGGCGAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010029--P:regulation of seed germination

KEGG

aly:ARALYDRAFT_475300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	34.76	1.00e-74	273.00
IUUC-Atr-002640	Amborella trichopoda	33.29	1.00e-92	333.00
IUUC-Ath-007598	Arabidopsis thaliana	93.00	0.00e+00	1244.00
IUUC-Bdi-014095	Brachypodium distachyon	35.36	7.00e-94	337.00
IUUC-Bol-015352	Brassica oleracea	76.13	0.00e+00	994.00
IUUC-Bra-017018	Brassica rapa	76.42	0.00e+00	967.00
IUUC-Gma-043325	Glycine max	45.44	3.00e-141	494.00
IUUC-Hvu-047204	Hordeum vulgare	36.76	8.00e-109	387.00
IUUC-Lpe-051010	Leersia perrieri	35.71	1.00e-76	280.00
IUUC-Mtr-058256	Medicago truncatula	44.49	9.00e-145	506.00
IUUC-Mac-064527	Musa acuminata	38.77	3.00e-57	215.00
IUUC-Obr-076695	Oryza brachyantha	35.29	6.00e-59	221.00
IUUC-Ogl-077133	Oryza glaberrima	37.68	1.00e-80	293.00
IUUC-Ogu-078633	Oryza glumaepatula	37.66	6.00e-80	291.00
IUUC-Oin-079248	Oryza indica	37.66	5.00e-80	291.00
IUUC-Ome-081678	Oryza meridionalis	36.52	1.00e-81	296.00
IUUC-Oni-082545	Oryza nivara	36.64	5.00e-80	291.00
IUUC-Opu-083981	Oryza punctata	36.43	6.00e-97	347.00
IUUC-Oru-084317	Oryza rufipogon	36.52	8.00e-81	294.00
IUUC-Osa-085294	Oryza sativa	36.45	3.00e-79	288.00
IUUC-Pop-099290	Populus trichocarpa	41.27	1.00e-150	526.00
IUUC-Sit-110113	Setaria italica	37.57	1.00e-110	393.00
IUUC-Stu-112861	Solanum tuberosum	39.54	3.00e-142	498.00
IUUC-Sbi-114188	Sorghum bicolor	36.13	2.00e-97	348.00
IUUC-Tae-123313	Triticum aestivum	34.64	6.00e-103	367.00
IUUC-Tur-126514	Triticum urartu	34.45	8.00e-84	303.00
IUUC-Vvi-131344	Vitis vinifera	44.75	2.00e-156	545.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence