iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044344

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835

Gene Name

LOC100811058; GLYMA_02G040900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G04640	GLYMA02G04640.2	GLYMA02G04640.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.50e-72	245.1	414	718

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl+N gN+CY N+vLQcL+ +++l+++l++  +++++     +++  +++++++ l+++  k+  +  sp  +l++++k+ +++   +++Da+
   Q: 414  FGLTNCGNSCYANAVLQCLAYTRPLTSYLFQgFHSKRC-----QKKGWCFTCEFEYLIQKA-KEGISPLSPIGILSKIHKIGSHLGRGREEDAH 501
           6******************************3334444.....45678**********999.99999*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           Efl++++d++++ +                  l++   +++  ++++l+s +F+g l+s+ikcl+c  +s+r+e ++dl++++ g+      +l
   Q: 502  EFLRCVVDTMQSIC------------------LKEVGVSSPLAEETTLVSYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIG----TL 573
           **************..................444566789999******************************************95....8* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
           +++L +ft++e l+++nky+c++ck +++a+kkl++ + P++L++ LkRf   ++ ++ ek+nk+v+fp+ L+++p+++ +++k   +  Y+L+
   Q: 574  EEALGQFTAPEILDKDNKYNCSRCKTYVKARKKLTVLEAPNILTIVLKRF---QS-GNFEKLNKSVQFPEVLNMAPYMSGTKDK---SPLYSLY 660
           **************************************************...33.4557********************6655...79***** PP
   S: 282  avvvHsG.sls....sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           avvvH    +     sGHYv+yvkn +g+W++ dDs+V++v+ ++vl+   + aY+l+Y r
   Q: 661  AVVVHLDlDIMnaafSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLS---ERAYMLLYAR 718
           *****76643323339********************************...********87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLVPGILGFH GLVYVVLALG FAVIRHVWRN VEAKREEEGM MMMMRMVADA DVTETEVAET 60
AEVTVASEVE YSSPVPVDGS RWFQCAVCCA PTTMRCSRCK AVRYCSGKCQ ISHWRLGHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTGAG TGAGATTCTA CTCTACTGAG GTACTTTTTA AGTGGGAAGA TTCCACAATC 60
CAAATCCAAT CCTAAACCGA AGGCCATTAA TTCAATGTTG AGCAATACTA GCCACACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100811058

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058108	Medicago truncatula	72.35	0.00e+00	1171.00
IUUC-Oba-075163	Oryza barthii	44.69	1.00e-144	507.00
IUUC-Ogl-077565	Oryza glaberrima	44.54	2.00e-144	506.00
IUUC-Ogu-078443	Oryza glumaepatula	44.40	1.00e-140	494.00
IUUC-Oni-082570	Oryza nivara	45.04	2.00e-144	506.00
IUUC-Oru-084237	Oryza rufipogon	45.04	2.00e-144	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence