iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065324

Ensembl Protein ID

GSMUA_Achr4P27170_001

UniProt Accession

M0SSH9; M0SSH9_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr4G27170_001	GSMUA_Achr4T27170_001	GSMUA_Achr4P27170_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-22	80.1	417	448

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+d vtc++f   ++++++sGs Dg++++W +
   Q: 417  HNDYVTCVQFnpiNENYFISGSIDGKVRMWKI 448
           9***********999***************85 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MARDFTFQEE EEEFFDSRDS VSSVFDSCPG TPLKNGLLPE DQFISWPSCD PRFEVWIKDP 60
VSVRERRDKF MKMFCADMMN CPPQGSDNPD EEVNVDGKIQ ADADGVESCS CSGNKLSVST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCAGAAGT GCGACACGGT GAGCTGAAGC CGAGGAGGTG GAGGAGGGCG CGAGGGCACC 60
CAAAACCCTC TAAATCTCAT TCCTTTGGCC GCCCGATCGC GGAGACCGAG GTGACGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mus:103982598

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002755	Amborella trichopoda	46.54	2.00e-172	598.00
IUUC-Bdi-014664	Brachypodium distachyon	48.26	2.00e-160	558.00
IUUC-Gma-043313	Glycine max	44.63	6.00e-160	556.00
IUUC-Lpe-051594	Leersia perrieri	44.77	7.00e-126	444.00
IUUC-Mtr-058554	Medicago truncatula	44.26	2.00e-162	565.00
IUUC-Oba-075653	Oryza barthii	45.81	2.00e-144	505.00
IUUC-Obr-076256	Oryza brachyantha	47.67	3.00e-152	531.00
IUUC-Ogl-077818	Oryza glaberrima	47.61	2.00e-148	519.00
IUUC-Ogu-078138	Oryza glumaepatula	45.75	2.00e-143	502.00
IUUC-Oin-079480	Oryza indica	47.61	3.00e-149	521.00
IUUC-Olo-080838	Oryza longistaminata	47.32	3.00e-149	521.00
IUUC-Ome-081177	Oryza meridionalis	48.94	8.00e-164	570.00
IUUC-Oni-082466	Oryza nivara	47.61	2.00e-149	522.00
IUUC-Opu-083616	Oryza punctata	48.46	1.00e-145	509.00
IUUC-Oru-084265	Oryza rufipogon	45.68	3.00e-144	505.00
IUUC-Osa-085283	Oryza sativa	47.75	5.00e-150	524.00
IUUC-Pop-099728	Populus trichocarpa	50.42	7.00e-178	616.00
IUUC-Sit-110689	Setaria italica	49.15	1.00e-159	556.00
IUUC-Stu-112354	Solanum tuberosum	44.11	2.00e-152	531.00
IUUC-Sbi-114128	Sorghum bicolor	45.97	1.00e-158	553.00
IUUC-Tca-121635	Theobroma cacao	49.93	0.00e+00	626.00
IUUC-Tae-122963	Triticum aestivum	51.79	7.00e-156	543.00
IUUC-Vvi-130979	Vitis vinifera	49.40	0.00e+00	635.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence