iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086353

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04009743

Gene Name

trim3a; LOC101175583

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003504.1	ENSORLT00000004365.1	ENSORLP00000004364.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.60e-09	36.5	43	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ + p+vlpC H+f+++Clq++  ++  +s + +CP+Cr
   Q: 43   CSICLDRYHN-PKVLPCLHTFCEKCLQNY-IPP--QSLTLSCPVCR 84
           ********99.******************.555..9999******8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MKMNGGKEVA GPERSWKVVI MAKCETGSTS PVVRQIDKQF LVCSICLDRY HNPKVLPCLH 60
TFCEKCLQNY IPPQSLTLSC PVCRQTSILP EKGVAALQNN FFITNLMEVL QRDPECSRPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATGA ATGGAGGGAA GGAGGTGGCG GGTCCAGAGC GGAGCTGGAA GGCATATGTT 60
AATGCAGCAG AGAGGGACAG CTGCATGGTG TGAGACAGGC CGTCCCCAAC TCTGAGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR003649--Bbox_C
IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR001258--NHL_repeat
IPR013017--NHL_repeat_subgr
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50194--FILAMIN_REPEAT
PS51125--NHL
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00630--Filamin
PF01436--NHL
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00557--IG_FLMN
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005401	Arabidopsis lyrata	30.88	5.00e-07	48.90
IUUC-Gac-042484	Gasterosteus aculeatus	93.78	0.00e+00	1438.00
IUUC-Gma-044219	Glycine max	36.36	3.00e-06	47.80
IUUC-Lpe-050809	Leersia perrieri	39.47	7.00e-08	52.80
IUUC-Ont-071742	Oreochromis niloticus	92.46	0.00e+00	1469.00
IUUC-Ogl-077726	Oryza glaberrima	39.47	2.00e-08	54.70
IUUC-Ogu-078410	Oryza glumaepatula	39.47	2.00e-08	54.70
IUUC-Oni-083081	Oryza nivara	39.47	3.00e-08	54.30
IUUC-Oru-084365	Oryza rufipogon	39.47	7.00e-08	53.10
IUUC-Osa-085953	Oryza sativa	39.47	3.00e-08	54.30
IUUC-Pfo-097095	Poecilia formosa	92.21	0.00e+00	1463.00
IUUC-Sly-111723	Solanum lycopersicum	33.33	2.00e-04	41.20
IUUC-Sbi-114481	Sorghum bicolor	37.33	1.00e-06	48.90
IUUC-Tru-118267	Takifugu rubripes	93.84	0.00e+00	1463.00
IUUC-Tni-119826	Tetraodon nigroviridis	93.31	0.00e+00	1432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence