iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099263

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_240834; POPTR_0013s02670g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s02670	POPTR_0013s02670.1	POPTR_0013s02670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-08	35.3	127	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++ p C Hvfh dC+ +w         + +CP+Cr
   Q: 127  CAVCLNEFedDETLRLIPnCDHVFHPDCIDAW------LESHTTCPVCR 169
           ********65333888889*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDSYTFIHRI LPLLILFFLA TPCGVVSQNN SSNDRGMYNN YAQVTPSMAI IIVVLVAALF 60
SMGFFSIYIR HCNEASANGS IRALGVVGLS RRAAASRGLD PGVIETFPTL IYSVVKGLKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGGACCCC ACTTTCTTTA CAGTCTTCGC TCTTCTGTTC CAACTTCCAC CCCATCCCTA 60
TTTTACAAGG CCCCCATCAT CTTCATTACT ACACCTCACC TCGTGCCTTC CCCGGCGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0013s02670g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000107	Aegilops tauschii	38.34	1.00e-30	126.00
IUUC-Afl-008548	Aspergillus flavus	37.04	1.00e-11	63.50
IUUC-Afu-009087	Aspergillus fumigatus	30.28	4.00e-13	67.40
IUUC-Bol-015706	Brassica oleracea	49.07	2.00e-61	228.00
IUUC-Gma-044379	Glycine max	59.61	1.00e-76	279.00
IUUC-Lpe-051270	Leersia perrieri	42.76	2.00e-45	175.00
IUUC-Mac-064577	Musa acuminata	44.53	1.00e-55	209.00
IUUC-Oba-075528	Oryza barthii	41.79	3.00e-42	165.00
IUUC-Obr-076839	Oryza brachyantha	41.28	6.00e-53	200.00
IUUC-Ogl-076953	Oryza glaberrima	40.85	5.00e-42	164.00
IUUC-Oin-079189	Oryza indica	40.71	1.00e-42	166.00
IUUC-Olo-080975	Oryza longistaminata	37.77	3.00e-28	118.00
IUUC-Ome-081499	Oryza meridionalis	54.48	6.00e-41	161.00
IUUC-Oni-082648	Oryza nivara	42.60	5.00e-42	164.00
IUUC-Opu-083745	Oryza punctata	43.94	1.00e-46	179.00
IUUC-Osa-085388	Oryza sativa	41.07	1.00e-42	166.00
IUUC-Ppe-101166	Prunus persica	57.40	3.00e-93	334.00
IUUC-Smo-108928	Selaginella moellendorffii	50.00	6.00e-23	97.80
IUUC-Sit-109787	Setaria italica	42.65	8.00e-49	187.00
IUUC-Sly-111292	Solanum lycopersicum	49.59	8.00e-68	250.00
IUUC-Stu-112111	Solanum tuberosum	47.72	4.00e-68	251.00
IUUC-Tca-120966	Theobroma cacao	58.19	6.00e-94	337.00
IUUC-Vvi-131515	Vitis vinifera	54.42	2.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence