iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016913

Ensembl Protein ID

Bra003735.1-P

UniProt Accession

M4CHQ2; M4CHQ2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003735	Bra003735.1	Bra003735.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	8.20e-31	106.9	111	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiR+tFni+nDf+peEe++vR+EnqWA
   Q: 111  KNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFSPEEEEEVRRENQWA 158
           79*********************************************9 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTKKIVLKS SDGESFEVDE AVALESQTIA HMVEDDCVDN GVPLPNVTSK ILAKVIEYCK 60
KHVDAAASKS EAVDGGGSSD DDLKAWDAEF MKIDQATLFE LILAANYLNI KNLLDLTCQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGACGA AGAAGATCGT GTTGAAGAGC TCCGATGGCG AGTCTTTCGA GGTCGACGAG 60
GCGGTGGCTC TCGAGTCTCA GACCATAGCC CACATGGTCG AAGACGACTG CGTCGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000465	Aegilops tauschii	76.43	8.00e-61	225.00
IUUC-Atr-002858	Amborella trichopoda	76.43	1.00e-56	211.00
IUUC-Aly-006066	Arabidopsis lyrata	77.51	2.00e-64	237.00
IUUC-Ath-007281	Arabidopsis thaliana	93.12	3.00e-73	266.00
IUUC-Bgr-012280	Blumeria graminis	50.69	6.00e-34	136.00
IUUC-Bci-013888	Botrytis cinerea	51.35	3.00e-28	117.00
IUUC-Bdi-014448	Brachypodium distachyon	70.76	5.00e-52	196.00
IUUC-Bol-015842	Brassica oleracea	100.00	5.00e-85	305.00
IUUC-Cre-022751	Chlamydomonas reinhardtii	68.59	1.00e-52	198.00
IUUC-Cho-024854	Choloepus hoffmanni	45.07	5.00e-12	62.80
IUUC-Cgl-026548	Colletotrichum gloeosporioides	46.26	6.00e-35	139.00
IUUC-Dme-032028	Drosophila melanogaster	55.97	4.00e-38	149.00
IUUC-Fox-037761	Fusarium oxysporum	47.65	8.00e-36	142.00
IUUC-Fso-038451	Fusarium solani	45.27	1.00e-33	135.00
IUUC-Ggr-039831	Gaeumannomyces graminis	47.26	3.00e-36	144.00
IUUC-Gma-043086	Glycine max	81.76	4.00e-67	246.00
IUUC-Hvu-047497	Hordeum vulgare	73.58	1.00e-52	198.00
IUUC-Lpe-050890	Leersia perrieri	74.69	2.00e-52	197.00
IUUC-Lma-053020	Leptosphaeria maculans	45.21	3.00e-32	130.00
IUUC-Mor-057176	Magnaporthe oryzae	47.26	2.00e-36	144.00
IUUC-Mpo-057471	Magnaporthe poae	47.95	9.00e-37	145.00
IUUC-Mtr-058763	Medicago truncatula	82.39	6.00e-69	252.00
IUUC-Oan-072985	Ornithorhynchus anatinus	45.19	1.00e-15	74.70
IUUC-Oba-075368	Oryza barthii	68.48	8.00e-55	205.00
IUUC-Obr-076218	Oryza brachyantha	77.50	1.00e-57	215.00
IUUC-Ogl-077679	Oryza glaberrima	68.48	9.00e-55	205.00
IUUC-Ogu-078125	Oryza glumaepatula	69.09	1.00e-55	208.00
IUUC-Oin-079779	Oryza indica	69.09	4.00e-55	206.00
IUUC-Ome-081330	Oryza meridionalis	68.29	7.00e-56	209.00
IUUC-Oni-082143	Oryza nivara	69.09	4.00e-55	206.00
IUUC-Oru-085023	Oryza rufipogon	69.03	1.00e-50	191.00
IUUC-Osa-085416	Oryza sativa	69.09	4.00e-55	206.00
IUUC-Olu-087667	Ostreococcus lucimarinus	65.16	2.00e-48	184.00
IUUC-Pca-100783	Procavia capensis	48.75	3.00e-30	124.00
IUUC-Pte-104224	Pyrenophora teres	45.14	2.00e-29	121.00
IUUC-Pyt-104750	Pyrenophora triticirepentis	44.52	1.00e-29	122.00
IUUC-Sly-111529	Solanum lycopersicum	77.99	2.00e-64	237.00
IUUC-Stu-111940	Solanum tuberosum	77.42	2.00e-62	230.00
IUUC-Sbi-114358	Sorghum bicolor	72.78	6.00e-50	189.00
IUUC-Tre-122004	Trichoderma reesei	44.59	8.00e-28	115.00
IUUC-Tvi-122449	Trichoderma virens	45.27	2.00e-28	117.00
IUUC-Uma-129517	Ustilago maydis	50.65	1.00e-36	145.00
IUUC-Vda-129691	Verticillium dahliae	42.95	1.00e-33	135.00
IUUC-Vvi-130994	Vitis vinifera	80.50	5.00e-66	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence