iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100077

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTR_0004s18130g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s18130	POPTR_0004s18130.1	POPTR_0004s18130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-31	108.6	308	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           Ht++v+ +++  +  t l+s++dD  + +WDl 
   Q: 308  HTEEVFQVEWdpNHeTVLASSADDRRLNIWDLN 340
           9**********644799**************85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAAAEDDQEA GQDQLDEEFS VWKKNTPVLY DLVISHPLEW PSLTVQWVPL AAPLPHPTDP 60
SSFSIHKLVL GTHTSDDFPN FLMVADAVLP TSVADAKIDT SCSSADSVIP KVEITQKIRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTTTAGC GGGAAATTAA AAACCCTAAA TAAAACCCCC ACACAAAAGG GAAAAAGGAA 60
AAAAAAATCT GCATAAAGAA GATAAAAATG GCAGCAGCGG AGGATGATCA AGAGGCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0004s18130g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Kpa-049258	Komagataella pastoris	33.75	2.00e-69	255.00
IUUC-Oba-075939	Oryza barthii	56.88	8.00e-118	416.00
IUUC-Ogu-078437	Oryza glumaepatula	57.40	8.00e-119	419.00
IUUC-Oin-079872	Oryza indica	57.40	2.00e-119	422.00
IUUC-Oni-082852	Oryza nivara	57.40	2.00e-119	422.00
IUUC-Opu-083343	Oryza punctata	56.62	7.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence