iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131203

UUCD1 version

UUC-ViV-00323

Ensembl Protein ID

VIT_03s0038g02430.t01

UniProt Accession

D7U551; D7U551_VITVI

Genbank Protein ID

CBI37870.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596508

Gene Name

VIT_03s0038g02430

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0038g02430	VIT_03s0038g02430.t01	VIT_03s0038g02430.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-31	107.0	295	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           Ht++v+ +++  +  t l+s++dD  ++vWDl 
   Q: 295  HTEEVFQVEWdpNHeTVLASSADDRRLMVWDLN 327
           9**********644799**************85 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGEEEMSVEQ VEEEFTVWKK NTPFLYDLII SHPLEWPSLT VQFLPSPPLP YALDSFSVHK 60
LVLGTHTSDG FPNYLMVADA FLPRNTAAPS EQNPTIPKVE ITKKIHVDGE VNRARCMPQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAGATTTT GGCGGGGGAA AACCAGAAAT TGCAGAGGGA GAGCGATGGG AGAAGAAGAA 60
ATGAGTGTTG AGCAGGTGGA GGAGGAGTTC ACAGTGTGGA AGAAGAACAC TCCATTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

vvi:100265787

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005978	Arabidopsis lyrata	68.59	5.00e-169	586.00
IUUC-Ath-007342	Arabidopsis thaliana	70.13	5.00e-167	579.00
IUUC-Bol-015255	Brassica oleracea	70.60	1.00e-167	582.00
IUUC-Bra-016771	Brassica rapa	70.63	6.00e-167	579.00
IUUC-Gma-043256	Glycine max	70.08	7.00e-152	529.00
IUUC-Mtr-058292	Medicago truncatula	69.63	4.00e-151	526.00
IUUC-Mac-065473	Musa acuminata	64.10	3.00e-128	450.00
IUUC-Oba-075939	Oryza barthii	59.57	6.00e-117	412.00
IUUC-Ogu-078437	Oryza glumaepatula	58.79	2.00e-118	417.00
IUUC-Oin-079872	Oryza indica	59.06	2.00e-119	421.00
IUUC-Oni-082852	Oryza nivara	59.06	2.00e-119	421.00
IUUC-Opu-083343	Oryza punctata	58.79	8.00e-120	422.00
IUUC-Pop-099884	Populus trichocarpa	73.65	8.00e-179	618.00
IUUC-Ppe-101659	Prunus persica	74.44	1.00e-166	578.00
IUUC-Sly-111542	Solanum lycopersicum	74.94	1.00e-173	601.00
IUUC-Stu-112318	Solanum tuberosum	74.67	1.00e-168	585.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence