iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Tca-120984

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RNI superfamily protein

Genbank Nucleotide ID

Gene Name

TCM_029690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_029690	EOY27990	EOY27990

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	47.92	3.00e-172	602.00	IUUC-Osa-085680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAKKLAGTSS NVHFHDIPDV ILSNIFSLVT DTRTRNAVSL VCLKWHLLER STRKSLTLRG 60
NIRDLFLLPT CFRAVTNLDL SFLSPWGHPL LDSSPNPVLL AQLLRNAFPS VVSLTVYVRN 120

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Nucleotide Sequence
(Fasta)

TTCTACCATA GAGGCCAGCT TTTATTTTGT CGACCCTTGC ATTCTCTTAG GCCACAGCTT 60
TAAATTTCTG TATTTTTATA ATCATCCTCA AAATGACACC TGTTACACTA GTGAATCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000912	Aegilops tauschii	52.53	2.00e-98	352.00
IUUC-Atr-002917	Amborella trichopoda	50.91	0.00e+00	626.00
IUUC-Bdi-014544	Brachypodium distachyon	48.42	6.00e-162	563.00
IUUC-Hvu-047568	Hordeum vulgare	49.55	5.00e-135	473.00
IUUC-Lpe-051227	Leersia perrieri	53.27	4.00e-110	390.00
IUUC-Oba-075679	Oryza barthii	49.41	8.00e-173	599.00
IUUC-Obr-076462	Oryza brachyantha	46.41	1.00e-148	519.00
IUUC-Ogu-078600	Oryza glumaepatula	47.54	2.00e-174	604.00
IUUC-Oin-079216	Oryza indica	50.56	5.00e-139	487.00
IUUC-Olo-080841	Oryza longistaminata	50.65	3.00e-142	498.00
IUUC-Ome-081978	Oryza meridionalis	44.44	2.00e-72	265.00
IUUC-Oni-082511	Oryza nivara	50.78	2.00e-134	471.00
IUUC-Opu-083879	Oryza punctata	51.31	2.00e-130	458.00
IUUC-Oru-084189	Oryza rufipogon	50.78	3.00e-134	471.00
IUUC-Osa-085680	Oryza sativa	48.16	1.00e-169	588.00
IUUC-Ppa-095907	Physcomitrella patens	46.03	5.00e-104	371.00
IUUC-Smo-109407	Selaginella moellendorffii	43.55	1.00e-139	489.00
IUUC-Sit-110373	Setaria italica	48.50	4.00e-165	573.00
IUUC-Sbi-114083	Sorghum bicolor	48.50	3.00e-159	554.00
IUUC-Tae-124517	Triticum aestivum	48.79	1.00e-153	535.00
IUUC-Tur-126493	Triticum urartu	52.60	5.00e-79	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence