iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113903

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G400200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g037880	Sb01g037880.1	Sb01g037880.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	23.93	2.00e-14	67.40	IUUC-Ots-000048

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MMAEAARAQP RQQGGWLDLP EDIMHDILLR LPPKFVVRCR AVCSSWLRLA SDRSFLLAHH 60
RRQPSLPLVY FILNDVGDPE VSEYRLAVFD LRAVELQTVV RFSGHGNGWM ARDRERRLAL 120

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Nucleotide Sequence
(Fasta)

CCAAATTCCC CAAATCCCGA ATCCTTCTGC TCCCGAACTG CCTCGGCCTG GCTGGGGCAG 60
CGTGGGCGCG GCGCGACGTC CTGCCGGCAC CAGCCAACTG ACGGGCGGCG GCGACGATGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR002469--Peptidase_S9B_N

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g037880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000136	Aegilops tauschii	37.76	5.00e-49	187.00
IUUC-Dre-027967	Danio rerio	34.62	1.60e-02	32.30
IUUC-Gac-041290	Gasterosteus aculeatus	38.46	5.00e-04	37.40
IUUC-Kpa-049114	Komagataella pastoris	32.56	1.40e+00	28.10
IUUC-Lpe-051707	Leersia perrieri	30.23	6.00e-19	87.40
IUUC-Mtr-058414	Medicago truncatula	25.14	7.00e-11	62.40
IUUC-Mlu-067931	Myotis lucifugus	40.00	9.00e-02	30.00
IUUC-Ont-072665	Oreochromis niloticus	29.46	2.00e-04	38.50
IUUC-Oba-075207	Oryza barthii	42.70	1.00e-67	250.00
IUUC-Ogl-077488	Oryza glaberrima	43.28	3.00e-68	251.00
IUUC-Ogu-078768	Oryza glumaepatula	42.24	3.00e-72	265.00
IUUC-Ome-081576	Oryza meridionalis	25.42	2.00e-10	59.70
IUUC-Oni-082058	Oryza nivara	43.54	8.00e-76	276.00
IUUC-Oru-084574	Oryza rufipogon	43.07	4.00e-77	280.00
IUUC-Osa-086099	Oryza sativa	43.07	4.00e-77	281.00
IUUC-Ola-086867	Oryzias latipes	43.48	1.00e-04	39.30
IUUC-Pma-094635	Petromyzon marinus	40.00	1.00e-03	35.00
IUUC-Sit-110314	Setaria italica	34.72	2.00e-47	181.00
IUUC-Tni-120432	Tetraodon nigroviridis	34.00	4.00e-03	33.90
IUUC-Tae-125096	Triticum aestivum	37.76	5.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence