iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076540

Ensembl Protein ID

OB02G25020.1

UniProt Accession

J3LCY5; J3LCY5_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G25020	OB02G25020.1	OB02G25020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-10	41.9	243	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 10   IslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++  +M+dPv+l+sG+++d+s+     +++ +t+++t+++  ++  +Pn+ l+++i+awc ++
   Q: 243  LQARIMSDPVILASGYSVDQSYHNYQKQHSPRTNTITDHSSPHTLSIPNHLLHDMISAWCLDH 305
           6789*****************98664455555*********99999**************876 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MADRLRLDME IREKIKVRRE AGRFSVGSSN SNSSTCSSNQ AAAADVARNQ EPLCPPALRS 60
EEFFHHGWEG TAVDAAMEPE ELAERMESRR HLQRGYSGLL GSPSSSPLPL PPRLWSSAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGACC GGCTTCGCCT CGACATGGAG ATAAGGGAGA AGATCAAGGT CAGGCGTGAA 60
GCGGGACGCT TCAGCGTGGG GAGCTCCAAC TCCAACTCCT CCACCTGCTC CTCCAATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000999	Aegilops tauschii	54.55	5.00e-125	440.00
IUUC-Bdi-014030	Brachypodium distachyon	53.88	2.00e-120	425.00
IUUC-Hvu-047644	Hordeum vulgare	55.14	3.00e-133	468.00
IUUC-Lpe-051369	Leersia perrieri	68.63	1.00e-166	578.00
IUUC-Oba-075958	Oryza barthii	68.73	4.00e-174	603.00
IUUC-Ogl-077377	Oryza glaberrima	68.73	4.00e-174	603.00
IUUC-Ogu-078931	Oryza glumaepatula	68.58	5.00e-174	603.00
IUUC-Oin-079164	Oryza indica	68.13	2.00e-171	594.00
IUUC-Olo-080746	Oryza longistaminata	68.73	7.00e-174	602.00
IUUC-Ome-081914	Oryza meridionalis	68.97	0.00e+00	627.00
IUUC-Oni-083073	Oryza nivara	68.46	2.00e-172	597.00
IUUC-Opu-084043	Oryza punctata	69.26	0.00e+00	652.00
IUUC-Oru-084550	Oryza rufipogon	68.73	7.00e-174	602.00
IUUC-Osa-086120	Oryza sativa	68.73	7.00e-174	602.00
IUUC-Sce-106173	Saccharomyces cerevisiae	24.59	6.70e-01	29.60
IUUC-Sit-109753	Setaria italica	50.99	2.00e-124	438.00
IUUC-Sbi-114025	Sorghum bicolor	56.03	4.00e-105	374.00
IUUC-Tae-123917	Triticum aestivum	49.53	3.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence