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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108092
UUCD1 version UUC-ScP-00118
Ensembl Protein ID SPCC18.05c.1:pep
UniProt Accession O74855; NLE1_SCHPO
Genbank Protein ID CAA21419.1
Protein Name Ribosome assembly protein 4; Notchless protein homolog 1; Ribosome biogenesis factor rsa4
Genbank Nucleotide ID CU329672
Gene Name SPCC18.05c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPCC18.05c SPCC18.05c.1 SPCC18.05c.1:pep
Annotation
mRNA Expression
GEO
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-61 199.4 175 211
UBD/Beta-Prp 5.20e-81 270.1 125 319
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt++v+c+a+ +d  ++++Gs D+ti+ WD+++g +
   Q: 175  GHTNWVSCVAWaPDaSIIATGSMDNTIRFWDPKKGSP 211
           8******************************988865 PP
   

   UBD/Beta-Prp
   S: 85   kcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
            c+ +++gh+ ++ s +fsps+ ++lv+Gs d t+r+wd +t++ +  t +gh+ +v+cv++ pd++++++Gs D+t+r+Wd k g+ + +  
   Q: 125  RCTASMNGHDGTIISAQFSPSTsSRLVTGSGDFTARLWDCDTQTPIA-TMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDAL 216
           69999999999999999999665999999999999999999999999.999999999999999999999999999999999999999999887 PP
   S: 177  gghtdsvyslsfdsng.......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
             ht+++  l +++           l+sgs+d+tv++w+++  + + tl ght+++++vr    +++++s s D++iriWd + g++l+ l++
   Q: 217  RRHTKPIMALCWQPLHlapdsgpYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDAKDGKCLHILKG 308
           77999999999888777888898999999999999999999999999999999999999988.999999999999999999999999999999 PP
   S: 263  hnssvisvavlsfg 276
           h+ +v   +   ++
   Q: 309  HAARVNHLS---LS 319
           995443333...33 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Involved in ribosome biogenesis. Required for processing and efficient intra-nuclear transport of pre-60S ribosomal subunits. Interacts with the AAA-ATPase Midasin, which is essential for the ATP-dependent dissociation of a group of nonribosomal factors from the pre-60S particle.
 Involved in ribosome biogenesis. Required for processing and efficient intra-nuclear transport of pre-60S ribosomal subunits. Interacts with the AAA-ATPase Midasin, which is essential for the ATP-dependent dissociation of a group of nonribosomal factors from the pre-60S particle.
Protein Sequence
(Fasta)
MATLLPPKSK RQKKESLNPT TIEIPEKFPL VNVQFRASDD SNELASLLVP GNSSVRQLEA 60
LLNQLLENSD DPVPYNFALH HEDETIEIQD NLYTSVFHNG LMKTEDHLTL LYTPQAVFRV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108092|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCACTACCAA ATCCTTCCTT TTTTAAATCC TTCTAAAATG GCGACTTTAC TGCCTCCTAA 60
AAGTAAACGT CAAAAAAAGG AGAGCTTAAA TCCTACTACT ATAGAAATTC CTGAAAAATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108092|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08154--NLE
PF00400--WD40
PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0005840--C:ribosome
GO:0000027--P:ribosomal large subunit assembly
GO:0042254--P:ribosome biogenesis
KEGG spo:SPCC18.05c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000437 Aegilops tauschii 46.90 2.00e-128 450.00
IUUC-Aml-001793 Ailuropoda melanoleuca 46.85 8.00e-125 438.00
IUUC-Atr-002507 Amborella trichopoda 46.26 4.00e-124 436.00
IUUC-Apl-003964 Anas platyrhynchos 49.34 2.00e-129 453.00
IUUC-Aca-005354 Anolis carolinensis 29.60 7.00e-40 155.00
IUUC-Aly-006396 Arabidopsis lyrata 46.51 2.00e-124 437.00
IUUC-Ath-007278 Arabidopsis thaliana 46.07 2.00e-123 433.00
IUUC-Ago-007951 Ashbya gossypii 54.97 1.00e-170 590.00
IUUC-Acl-008298 Aspergillus clavatus 52.61 6.00e-147 511.00
IUUC-Afl-008581 Aspergillus flavus 57.34 1.00e-122 430.00
IUUC-Afu-008906 Aspergillus fumigatus 53.49 8.00e-148 514.00
IUUC-Ani-009189 Aspergillus nidulans 51.26 1.00e-141 494.00
IUUC-Ang-009630 Aspergillus niger 52.33 8.00e-154 535.00
IUUC-Aor-010038 Aspergillus oryzae 52.33 1.00e-156 543.00
IUUC-Ate-010278 Aspergillus terreus 50.66 8.00e-147 511.00
IUUC-Ame-011890 Astyanax mexicanus 49.79 6.00e-129 452.00
IUUC-Bgr-012011 Blumeria graminis 48.66 2.00e-144 503.00
IUUC-Bta-012964 Bos taurus 47.27 4.00e-126 442.00
IUUC-Bci-013592 Botrytis cinerea 49.14 3.00e-132 463.00
IUUC-Bdi-015035 Brachypodium distachyon 46.81 4.00e-128 449.00
IUUC-Bol-015501 Brassica oleracea 46.12 1.00e-123 434.00
IUUC-Bra-017642 Brassica rapa 46.12 6.00e-124 435.00
IUUC-Cel-018430 Caenorhabditis elegans 48.01 7.00e-128 448.00
IUUC-Cja-019125 Callithrix jacchus 47.48 4.00e-126 442.00
IUUC-Cfa-021013 Canis familiaris 48.39 2.00e-123 433.00
IUUC-Cpo-021743 Cavia porcellus 46.64 6.00e-125 438.00
IUUC-Cre-022973 Chlamydomonas reinhardtii 41.65 2.00e-109 387.00
IUUC-Csa-024270 Chlorocebus sabaeus 47.27 8.00e-126 441.00
IUUC-Cin-025795 Ciona intestinalis 45.74 5.00e-124 436.00
IUUC-Csv-025953 Ciona savignyi 46.64 1.00e-124 437.00
IUUC-Cgl-026517 Colletotrichum gloeosporioides 44.99 4.00e-114 402.00
IUUC-Cne-026901 Cryptococcus neoformans 44.11 5.00e-127 446.00
IUUC-Cme-027281 Cyanidioschyzon merolae 41.02 2.00e-95 341.00
IUUC-Dre-028515 Danio rerio 49.16 7.00e-128 448.00
IUUC-Dno-029596 Dasypus novemcinctus 47.27 1.00e-124 437.00
IUUC-Dor-030494 Dipodomys ordii 45.63 3.00e-126 443.00
IUUC-Dse-031538 Dothistroma septosporum 51.17 8.00e-144 501.00
IUUC-Dme-031974 Drosophila melanogaster 44.06 1.00e-114 404.00
IUUC-Ete-032948 Echinops telfairi 55.07 6.00e-65 239.00
IUUC-Eca-033399 Equus caballus 46.43 2.00e-124 437.00
IUUC-Eeu-035013 Erinaceus europaeus 55.56 1.00e-64 238.00
IUUC-Fca-035860 Felis catus 46.85 2.00e-125 440.00
IUUC-Fal-037069 Ficedula albicollis 55.37 1.00e-78 283.00
IUUC-Fox-038059 Fusarium oxysporum 47.08 3.00e-129 453.00
IUUC-Fso-038445 Fusarium solani 47.67 6.00e-130 455.00
IUUC-Gmo-039319 Gadus morhua 48.09 5.00e-117 412.00
IUUC-Ggr-040095 Gaeumannomyces graminis 49.14 2.00e-134 470.00
IUUC-Gga-040303 Gallus gallus 55.79 1.00e-79 286.00
IUUC-Gac-042267 Gasterosteus aculeatus 46.09 6.00e-120 422.00
IUUC-Gma-043974 Glycine max 45.47 2.00e-128 450.00
IUUC-Ggo-044637 Gorilla gorilla 47.48 3.00e-126 443.00
IUUC-Hsa-046128 Homo sapiens 47.48 2.00e-126 443.00
IUUC-Hvu-047373 Hordeum vulgare 46.17 7.00e-128 448.00
IUUC-Itr-048070 Ictidomys tridecemlineatus 46.78 5.00e-125 439.00
IUUC-Kpa-049274 Komagataella pastoris 54.17 9.00e-165 571.00
IUUC-Lch-049907 Latimeria chalumnae 46.76 6.00e-123 432.00
IUUC-Lpe-050778 Leersia perrieri 45.79 1.00e-107 381.00
IUUC-Loc-051889 Lepisosteus oculatus 48.74 2.00e-125 440.00
IUUC-Lma-053041 Leptosphaeria maculans 47.59 6.00e-132 462.00
IUUC-Laf-053598 Loxodonta africana 47.48 1.00e-125 441.00
IUUC-Mcc-055660 Macaca mulatta 47.06 2.00e-125 440.00
IUUC-Meu-056197 Macropus eugenii 50.70 4.00e-105 373.00
IUUC-Mor-056949 Magnaporthe oryzae 47.91 3.00e-123 433.00
IUUC-Mpo-057571 Magnaporthe poae 56.94 1.00e-66 244.00
IUUC-Mtr-058530 Medicago truncatula 47.56 6.00e-122 428.00
IUUC-Mla-059133 Melampsora laricipopulina 44.11 8.00e-115 405.00
IUUC-Mga-059252 Meleagris gallopavo 51.51 3.00e-109 385.00
IUUC-Mvi-060522 Microbotryum violaceum 46.45 1.00e-131 461.00
IUUC-Mmr-061117 Microcebus murinus 46.43 2.00e-124 437.00
IUUC-Mdo-062892 Monodelphis domestica 47.90 7.00e-127 445.00
IUUC-Mmu-064108 Mus musculus 50.62 1.00e-121 427.00
IUUC-Mac-064430 Musa acuminata 46.27 1.00e-125 441.00
IUUC-Mpu-065882 Mustela putorius furo 46.41 7.00e-125 438.00
IUUC-Mlu-068123 Myotis lucifugus 46.64 7.00e-125 438.00
IUUC-Nfi-068484 Neosartorya fischeri 53.10 3.00e-147 513.00
IUUC-Ncr-068649 Neurospora crassa 47.31 4.00e-128 449.00
IUUC-Nle-069140 Nomascus leucogenys 47.06 5.00e-126 442.00
IUUC-Opr-070220 Ochotona princeps 50.84 4.00e-106 376.00
IUUC-Ont-072643 Oreochromis niloticus 49.16 3.00e-129 453.00
IUUC-Ocu-074007 Oryctolagus cuniculus 51.60 6.00e-123 432.00
IUUC-Oba-075904 Oryza barthii 47.13 3.00e-127 446.00
IUUC-Obr-076280 Oryza brachyantha 46.60 1.00e-127 447.00
IUUC-Ogl-077425 Oryza glaberrima 47.67 2.00e-127 447.00
IUUC-Ogu-078586 Oryza glumaepatula 47.13 3.00e-127 446.00
IUUC-Oin-079489 Oryza indica 46.17 3.00e-118 416.00
IUUC-Olo-080587 Oryza longistaminata 43.54 1.00e-122 432.00
IUUC-Ome-081905 Oryza meridionalis 47.35 3.00e-127 446.00
IUUC-Oni-083022 Oryza nivara 48.14 3.00e-127 446.00
IUUC-Opu-083615 Oryza punctata 47.35 2.00e-127 447.00
IUUC-Oru-085076 Oryza rufipogon 48.14 3.00e-127 446.00
IUUC-Osa-085516 Oryza sativa 48.14 3.00e-127 446.00
IUUC-Ola-087290 Oryzias latipes 48.52 7.00e-128 448.00
IUUC-Olu-087898 Ostreococcus lucimarinus 49.07 2.00e-125 440.00
IUUC-Oga-088980 Otolemur garnettii 46.64 7.00e-125 438.00
IUUC-Oar-089580 Ovis aries 43.24 3.00e-96 343.00
IUUC-Ptr-090845 Pan troglodytes 47.27 5.00e-126 442.00
IUUC-Pan-092836 Papio anubis 47.06 8.00e-126 441.00
IUUC-Psi-093232 Pelodiscus sinensis 28.66 8.00e-39 152.00
IUUC-Pno-095052 Phaeosphaeria nodorum 49.80 1.00e-144 504.00
IUUC-Ppa-095432 Physcomitrella patens 47.91 4.00e-132 462.00
IUUC-Pfo-096963 Poecilia formosa 42.77 7.00e-103 365.00
IUUC-Pab-097716 Pongo abelii 45.17 3.00e-117 413.00
IUUC-Pop-099224 Populus trichocarpa 46.60 3.00e-129 453.00
IUUC-Pca-100682 Procavia capensis 49.44 1.00e-101 361.00
IUUC-Ppe-101819 Prunus persica 47.27 3.00e-128 449.00
IUUC-Pva-102338 Pteropus vampyrus 39.23 1.00e-71 261.00
IUUC-Pgr-103583 Puccinia graminis 49.64 2.00e-116 410.00
IUUC-Ptt-103737 Puccinia triticina 36.83 2.00e-87 314.00
IUUC-Pte-104150 Pyrenophora teres 49.41 2.00e-141 493.00
IUUC-Pyt-104606 Pyrenophora triticirepentis 49.22 5.00e-141 492.00
IUUC-Rno-105987 Rattus norvegicus 47.06 5.00e-126 442.00
IUUC-Sce-106315 Saccharomyces cerevisiae 55.92 6.00e-169 585.00
IUUC-Sha-107273 Sarcophilus harrisii 48.53 2.00e-129 454.00
IUUC-Sja-107677 Schizosaccharomyces japonicus 78.37 0.00e+00 823.00
IUUC-Ssl-108442 Sclerotinia sclerotiorum 46.06 5.00e-129 452.00
IUUC-Smo-108976 Selaginella moellendorffii 47.85 4.00e-126 442.00
IUUC-Sit-110329 Setaria italica 46.38 5.00e-127 446.00
IUUC-Sly-111830 Solanum lycopersicum 48.82 2.00e-131 460.00
IUUC-Stu-112603 Solanum tuberosum 48.82 4.00e-131 459.00
IUUC-Sbi-114560 Sorghum bicolor 47.37 4.00e-127 446.00
IUUC-Sre-115133 Sporisorium reilianum 37.40 1.00e-107 381.00
IUUC-Ssc-115903 Sus scrofa 46.69 1.00e-125 441.00
IUUC-Tgu-116798 Taeniopygia guttata 48.53 4.00e-129 452.00
IUUC-Tru-118361 Takifugu rubripes 45.82 7.00e-130 455.00
IUUC-Tsy-118849 Tarsius syrichta 46.62 3.00e-124 436.00
IUUC-Tni-120094 Tetraodon nigroviridis 48.10 1.00e-129 454.00
IUUC-Tca-121634 Theobroma cacao 46.39 6.00e-125 438.00
IUUC-Tre-122051 Trichoderma reesei 46.60 4.00e-124 436.00
IUUC-Tvi-122322 Trichoderma virens 47.78 1.00e-129 454.00
IUUC-Tae-125822 Triticum aestivum 46.81 1.00e-128 451.00
IUUC-Tur-126766 Triticum urartu 41.75 1.00e-120 424.00
IUUC-Tme-127175 Tuber melanosporum 58.03 1.00e-168 584.00
IUUC-Tbe-127779 Tupaia belangeri 47.36 6.00e-118 415.00
IUUC-Ttr-128224 Tursiops truncatus 47.72 2.00e-118 417.00
IUUC-Uma-129537 Ustilago maydis 37.76 1.00e-108 385.00
IUUC-Vda-129927 Verticillium dahliae 49.13 8.00e-129 451.00
IUUC-Vpa-130658 Vicugna pacos 66.44 3.00e-56 210.00
IUUC-Vvi-131659 Vitis vinifera 46.92 5.00e-129 452.00
IUUC-Xtr-132918 Xenopus tropicalis 46.25 6.00e-121 425.00
IUUC-Xma-133700 Xiphophorus maculatus 47.47 3.00e-126 442.00
IUUC-Yli-134478 Yarrowia lipolytica 55.34 3.00e-170 589.00
IUUC-Zma-135835 Zea mays 43.98 2.00e-121 427.00
Created Date 25-Jun-2017

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