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Tag Content
UUCD2 ID IUUC-Dre-028377
UUCD1 version UUC-DaR-00310
Ensembl Protein ID ENSDARP00000016859.6
UniProt Accession Q1L8F5; Q1L8F5_DANRE
Genbank Protein ID ENSDARP00000016859
Protein Name CCR4-NOT transcription complex, subunit 4b
Genbank Nucleotide ID CR792454
Gene Name cnot4b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000007639.6 ENSDART00000022646.6 ENSDARP00000016859.6
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 44.90 2.00e-48 189.00 IUUC-Sce-106312
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Danio rerio
Protein Sequence
(Fasta)
MSCSPEVKED PMECPLCMEP LEIDDVNFFP CTCGYQICRF CWHRIRTDEN GLCPACRKPY 60
PEDPAVYKPL SQEELQRIKN EKKQKQNERK QKITENRKHL SSVRVVQRNL VFVVGLSQRL 120
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Protein Fasta Sequence


>IUUC-Dre-028377|E3,RING|Danio rerio
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Nucleotide Sequence
(Fasta)
AATGTAAGAT GGTGGTTAGG AGGCACTGTC GCTCTACAGA GAGGCTGTAA CACACAAGAC 60
TTGGTGTTTT CGCATCAAAT CACACAGGAG CAGGGACAAA CCATCCCAGG AATTTATACT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028377|E3,RING|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50102--RRM
PS50103--ZF_C3H1
PS50089--ZF_RING_2
Pfam

PF00076--RRM_1
SMART

SM00361--RRM_1
Gene Ontology

GO:0030014--C:CCR4-NOT complex
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000464 Aegilops tauschii 42.04 1.00e-53 205.00
IUUC-Aml-002384 Ailuropoda melanoleuca 67.49 0.00e+00 890.00
IUUC-Atr-002462 Amborella trichopoda 46.49 3.00e-61 231.00
IUUC-Apl-003756 Anas platyrhynchos 71.13 0.00e+00 1030.00
IUUC-Aca-004643 Anolis carolinensis 70.63 0.00e+00 1014.00
IUUC-Aly-006093 Arabidopsis lyrata 39.36 2.00e-54 207.00
IUUC-Ath-007371 Arabidopsis thaliana 41.67 2.00e-54 207.00
IUUC-Ago-007799 Ashbya gossypii 48.90 5.00e-56 212.00
IUUC-Acl-008077 Aspergillus clavatus 37.18 2.00e-40 162.00
IUUC-Afl-008720 Aspergillus flavus 38.03 7.00e-45 177.00
IUUC-Afu-008905 Aspergillus fumigatus 37.55 9.00e-42 166.00
IUUC-Ani-009264 Aspergillus nidulans 38.24 7.00e-26 112.00
IUUC-Ang-009537 Aspergillus niger 38.03 2.00e-44 175.00
IUUC-Aor-010123 Aspergillus oryzae 34.05 7.00e-27 117.00
IUUC-Ate-010409 Aspergillus terreus 38.89 7.00e-45 177.00
IUUC-Ame-011538 Astyanax mexicanus 81.27 0.00e+00 1110.00
IUUC-Bgr-012062 Blumeria graminis 42.37 3.00e-54 208.00
IUUC-Bta-012419 Bos taurus 64.64 0.00e+00 729.00
IUUC-Bci-013633 Botrytis cinerea 41.28 5.00e-53 203.00
IUUC-Bdi-014913 Brachypodium distachyon 42.92 5.00e-54 206.00
IUUC-Bol-016407 Brassica oleracea 44.34 8.00e-57 215.00
IUUC-Bra-017755 Brassica rapa 44.80 4.00e-57 216.00
IUUC-Cel-018123 Caenorhabditis elegans 58.80 4.00e-85 309.00
IUUC-Cja-019705 Callithrix jacchus 65.51 0.00e+00 902.00
IUUC-Cfa-020440 Canis familiaris 66.01 0.00e+00 907.00
IUUC-Cpo-022091 Cavia porcellus 86.35 8.00e-141 493.00
IUUC-Cre-022872 Chlamydomonas reinhardtii 34.72 1.00e-11 65.10
IUUC-Csa-024202 Chlorocebus sabaeus 65.80 0.00e+00 900.00
IUUC-Cho-024410 Choloepus hoffmanni 96.26 2.00e-97 350.00
IUUC-Cin-025558 Ciona intestinalis 70.59 3.00e-111 395.00
IUUC-Cgl-026687 Colletotrichum gloeosporioides 44.87 2.00e-55 211.00
IUUC-Cne-027084 Cryptococcus neoformans 37.40 1.00e-43 172.00
IUUC-Cme-027148 Cyanidioschyzon merolae 30.43 1.00e-22 101.00
IUUC-Dno-029100 Dasypus novemcinctus 66.09 0.00e+00 906.00
IUUC-Dor-030310 Dipodomys ordii 94.32 8.00e-117 414.00
IUUC-Dse-031514 Dothistroma septosporum 41.42 4.00e-48 186.00
IUUC-Dme-031735 Drosophila melanogaster 66.20 1.00e-105 378.00
IUUC-Ete-033091 Echinops telfairi 65.55 0.00e+00 859.00
IUUC-Eca-033506 Equus caballus 65.92 0.00e+00 906.00
IUUC-Eeu-034506 Erinaceus europaeus 62.34 0.00e+00 652.00
IUUC-Fca-036033 Felis catus 67.36 0.00e+00 738.00
IUUC-Fal-037540 Ficedula albicollis 70.94 0.00e+00 1041.00
IUUC-Fox-037944 Fusarium oxysporum 44.07 1.00e-57 218.00
IUUC-Fso-038172 Fusarium solani 41.53 1.00e-46 182.00
IUUC-Gmo-039211 Gadus morhua 69.34 0.00e+00 864.00
IUUC-Ggr-040096 Gaeumannomyces graminis 46.61 6.00e-61 230.00
IUUC-Gga-040487 Gallus gallus 71.41 0.00e+00 1036.00
IUUC-Gac-042294 Gasterosteus aculeatus 72.66 0.00e+00 1007.00
IUUC-Gma-043229 Glycine max 44.58 3.00e-56 213.00
IUUC-Ggo-044950 Gorilla gorilla 63.60 0.00e+00 779.00
IUUC-Hsa-046666 Homo sapiens 67.42 0.00e+00 733.00
IUUC-Hvu-047405 Hordeum vulgare 42.48 1.00e-53 205.00
IUUC-Itr-047888 Ictidomys tridecemlineatus 93.96 8.00e-141 492.00
IUUC-Kpa-049260 Komagataella pastoris 46.49 6.00e-54 205.00
IUUC-Lch-050203 Latimeria chalumnae 71.38 0.00e+00 993.00
IUUC-Lpe-051195 Leersia perrieri 43.23 9.00e-53 202.00
IUUC-Loc-052886 Lepisosteus oculatus 75.86 0.00e+00 1043.00
IUUC-Lma-053073 Leptosphaeria maculans 42.36 2.00e-51 197.00
IUUC-Laf-053490 Loxodonta africana 66.01 0.00e+00 901.00
IUUC-Mcc-055724 Macaca mulatta 65.96 0.00e+00 907.00
IUUC-Meu-056787 Macropus eugenii 61.17 1.00e-116 414.00
IUUC-Mor-056921 Magnaporthe oryzae 46.19 2.00e-59 223.00
IUUC-Mpo-057616 Magnaporthe poae 46.19 7.00e-60 225.00
IUUC-Mtr-058426 Medicago truncatula 42.86 4.00e-53 203.00
IUUC-Mla-059146 Melampsora laricipopulina 41.28 2.00e-45 177.00
IUUC-Mga-059372 Meleagris gallopavo 71.00 0.00e+00 1030.00
IUUC-Mvi-060479 Microbotryum violaceum 36.53 5.00e-31 130.00
IUUC-Mmr-061012 Microcebus murinus 65.68 0.00e+00 911.00
IUUC-Mdo-062330 Monodelphis domestica 66.87 0.00e+00 915.00
IUUC-Mmu-063894 Mus musculus 65.34 0.00e+00 879.00
IUUC-Mac-064805 Musa acuminata 44.44 1.00e-56 214.00
IUUC-Mpu-066894 Mustela putorius furo 66.01 0.00e+00 907.00
IUUC-Mlu-067321 Myotis lucifugus 64.64 0.00e+00 729.00
IUUC-Nfi-068451 Neosartorya fischeri 37.30 9.00e-42 166.00
IUUC-Ncr-068667 Neurospora crassa 44.49 1.00e-52 202.00
IUUC-Nle-070058 Nomascus leucogenys 65.96 0.00e+00 876.00
IUUC-Opr-071108 Ochotona princeps 62.44 7.00e-115 408.00
IUUC-Ont-071541 Oreochromis niloticus 72.84 0.00e+00 1006.00
IUUC-Oan-073232 Ornithorhynchus anatinus 92.99 2.00e-142 499.00
IUUC-Ocu-074893 Oryctolagus cuniculus 92.62 6.00e-142 498.00
IUUC-Oba-075623 Oryza barthii 39.38 3.00e-28 119.00
IUUC-Obr-076653 Oryza brachyantha 42.92 6.00e-55 209.00
IUUC-Ogl-077946 Oryza glaberrima 42.57 3.00e-44 171.00
IUUC-Ogu-078775 Oryza glumaepatula 43.61 1.00e-52 199.00
IUUC-Oin-079214 Oryza indica 43.61 9.00e-55 209.00
IUUC-Olo-080799 Oryza longistaminata 32.29 8.00e-29 120.00
IUUC-Ome-081843 Oryza meridionalis 40.42 8.00e-52 198.00
IUUC-Oni-082944 Oryza nivara 39.38 6.00e-30 124.00
IUUC-Opu-083668 Oryza punctata 43.17 1.00e-54 209.00
IUUC-Oru-084249 Oryza rufipogon 35.35 2.00e-35 144.00
IUUC-Osa-086233 Oryza sativa 43.61 5.00e-55 209.00
IUUC-Ola-087121 Oryzias latipes 71.32 0.00e+00 927.00
IUUC-Olu-087772 Ostreococcus lucimarinus 42.11 2.00e-41 162.00
IUUC-Oga-088556 Otolemur garnettii 65.56 0.00e+00 911.00
IUUC-Oar-089768 Ovis aries 65.43 0.00e+00 887.00
IUUC-Ptr-090585 Pan troglodytes 65.84 0.00e+00 908.00
IUUC-Pan-092625 Papio anubis 65.80 0.00e+00 900.00
IUUC-Psi-093462 Pelodiscus sinensis 70.09 0.00e+00 967.00
IUUC-Pma-094468 Petromyzon marinus 78.55 4.00e-127 449.00
IUUC-Pno-094812 Phaeosphaeria nodorum 38.76 4.00e-28 121.00
IUUC-Ppa-095589 Physcomitrella patens 51.79 7.00e-15 75.10
IUUC-Pfo-096762 Poecilia formosa 71.27 0.00e+00 953.00
IUUC-Pab-097890 Pongo abelii 65.80 0.00e+00 899.00
IUUC-Pop-099764 Populus trichocarpa 43.10 1.00e-58 222.00
IUUC-Pca-101121 Procavia capensis 61.12 2.00e-119 422.00
IUUC-Ppe-102076 Prunus persica 43.31 2.00e-56 214.00
IUUC-Pva-102489 Pteropus vampyrus 65.67 0.00e+00 846.00
IUUC-Pgr-103568 Puccinia graminis 40.89 1.00e-47 185.00
IUUC-Ptt-103721 Puccinia triticina 36.36 2.00e-29 124.00
IUUC-Pte-104118 Pyrenophora teres 42.54 2.00e-54 207.00
IUUC-Pyt-104612 Pyrenophora triticirepentis 42.54 1.00e-54 208.00
IUUC-Rno-105627 Rattus norvegicus 65.17 0.00e+00 894.00
IUUC-Sce-106312 Saccharomyces cerevisiae 44.90 7.00e-55 208.00
IUUC-Sha-106619 Sarcophilus harrisii 67.25 0.00e+00 920.00
IUUC-Sja-107765 Schizosaccharomyces japonicus 49.35 1.00e-55 211.00
IUUC-Spo-108328 Schizosaccharomyces pombe 51.52 5.00e-61 228.00
IUUC-Ssl-108577 Sclerotinia sclerotiorum 42.50 5.00e-50 192.00
IUUC-Smo-108760 Selaginella moellendorffii 44.64 1.00e-58 219.00
IUUC-Sit-109923 Setaria italica 39.83 2.00e-51 198.00
IUUC-Sly-110900 Solanum lycopersicum 39.48 1.00e-50 195.00
IUUC-Stu-112226 Solanum tuberosum 39.48 2.00e-50 194.00
IUUC-Sar-113620 Sorex araneus 72.46 3.00e-166 578.00
IUUC-Sbi-114318 Sorghum bicolor 40.52 8.00e-54 206.00
IUUC-Sre-114956 Sporisorium reilianum 46.50 3.00e-64 240.00
IUUC-Ssc-116116 Sus scrofa 93.96 2.00e-140 491.00
IUUC-Tgu-117357 Taeniopygia guttata 71.41 0.00e+00 1036.00
IUUC-Tru-118759 Takifugu rubripes 70.45 0.00e+00 757.00
IUUC-Tsy-119387 Tarsius syrichta 64.35 0.00e+00 830.00
IUUC-Tni-120536 Tetraodon nigroviridis 65.97 9.00e-136 477.00
IUUC-Tca-121035 Theobroma cacao 45.18 2.00e-57 218.00
IUUC-Tre-121996 Trichoderma reesei 41.95 6.00e-47 183.00
IUUC-Tvi-122371 Trichoderma virens 43.22 7.00e-54 206.00
IUUC-Tae-124373 Triticum aestivum 42.48 2.00e-53 204.00
IUUC-Tur-126324 Triticum urartu 42.48 9.00e-54 206.00
IUUC-Tme-127072 Tuber melanosporum 39.56 4.00e-42 167.00
IUUC-Tbe-128107 Tupaia belangeri 62.01 0.00e+00 798.00
IUUC-Ttr-128846 Tursiops truncatus 67.54 0.00e+00 884.00
IUUC-Uma-129607 Ustilago maydis 46.50 2.00e-64 241.00
IUUC-Vda-129971 Verticillium dahliae 42.38 9.00e-47 183.00
IUUC-Vpa-130298 Vicugna pacos 61.94 0.00e+00 652.00
IUUC-Vvi-131651 Vitis vinifera 44.74 7.00e-58 219.00
IUUC-Xtr-132728 Xenopus tropicalis 69.49 0.00e+00 772.00
IUUC-Xma-133789 Xiphophorus maculatus 70.34 0.00e+00 952.00
IUUC-Yli-134461 Yarrowia lipolytica 42.22 2.00e-47 183.00
IUUC-Zma-135031 Zea mays 41.95 8.00e-54 205.00
Created Date 25-Jun-2017

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