iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113783

UUCD1 version

UUC-SoB-00409

Ensembl Protein ID

Sb02g032190.1

UniProt Accession

A0A1B6QE17; A0A1B6QE17_SORBI

Genbank Protein ID

KXG36150.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G290500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g032190	Sb02g032190.1	Sb02g032190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.20e-21	75.6	27	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++f+CpI+++lMrdPvv+++G+ ++r++I++w+++++       cP+t+ +++  dl P l+lr+ +++w ++++
   Q: 27   SAFVCPITMQLMRDPVVIETGHAFEREAIARWFSECRDlgrgpCCPITMLEVHRADLRPVLALRAAVEEWTDRQQ 101
           68*******************************9999888899***************************99886 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MERHRQGSWR QQEDGLDGHE EEDGELSAFV CPITMQLMRD PVVIETGHAF EREAIARWFS 60
ECRDLGRGPC CPITMLEVHR ADLRPVLALR AAVEEWTDRQ QRDELRRACQ WLTKDATEKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCCGAATC ACCACCCCCG GCCACAATGC CCAGTCGCAG GCTCTCGCTT CCACATCCCC 60
CGCTTCCCCG CGGCCGCGGG CCACCACCGT CAGCCTTGCC TCCGAGCTGC CCACGCACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cne-026806	Cryptococcus neoformans	26.09	2.00e-06	45.80
IUUC-Lpe-051058	Leersia perrieri	62.03	0.00e+00	641.00
IUUC-Oba-075503	Oryza barthii	64.63	0.00e+00	652.00
IUUC-Obr-076656	Oryza brachyantha	63.50	0.00e+00	652.00
IUUC-Ogl-077673	Oryza glaberrima	64.63	0.00e+00	654.00
IUUC-Ogu-078148	Oryza glumaepatula	64.80	0.00e+00	654.00
IUUC-Oin-080038	Oryza indica	64.80	0.00e+00	656.00
IUUC-Olo-080957	Oryza longistaminata	64.58	0.00e+00	654.00
IUUC-Ome-081569	Oryza meridionalis	64.97	0.00e+00	653.00
IUUC-Oni-082401	Oryza nivara	64.80	0.00e+00	655.00
IUUC-Opu-083886	Oryza punctata	63.83	2.00e-180	625.00
IUUC-Oru-084768	Oryza rufipogon	64.80	0.00e+00	655.00
IUUC-Osa-085588	Oryza sativa	61.81	0.00e+00	657.00
IUUC-Ptt-103827	Puccinia triticina	40.74	3.60e-01	28.90
IUUC-Sit-109984	Setaria italica	76.53	0.00e+00	785.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence