iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088455

Ensembl Protein ID

ENSOGAP00000005273.2

UniProt Accession

H0WT25; H0WT25_OTOGA

Genbank Protein ID

ENSOGAP00000005273

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03073294

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000005898.2	ENSOGAT00000005901.2	ENSOGAP00000005273.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-08	34.1	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 288  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 325
           78999*******************************97 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAEVPGAALS QAGWYLSDEG IEACTSSPDK VSVNDIIPIA LNTDLRTIGK KFLPSDINGG 60
KIEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHMSCTAVE FSYMSKISLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGTATCAA GTAAGAGGTC TCACCCCCAC CCCCACCCCG GCCCCCCACC ACCCCCGGCC 60
TAAGCAGCTA CCATGGCCGA GGTCCCCGGC GCGGCGTTGT CCCAGGCGGG TTGGTAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	33.85	4.00e-16	79.00
IUUC-Aml-001751	Ailuropoda melanoleuca	91.26	0.00e+00	1305.00
IUUC-Atr-002788	Amborella trichopoda	31.75	2.00e-21	96.70
IUUC-Apl-004055	Anas platyrhynchos	74.78	0.00e+00	934.00
IUUC-Aca-004367	Anolis carolinensis	71.41	0.00e+00	1030.00
IUUC-Aly-006072	Arabidopsis lyrata	32.18	1.00e-22	100.00
IUUC-Ath-007491	Arabidopsis thaliana	31.68	3.00e-22	99.40
IUUC-Ame-011439	Astyanax mexicanus	66.67	4.00e-109	389.00
IUUC-Bta-012894	Bos taurus	87.23	0.00e+00	1277.00
IUUC-Bdi-014462	Brachypodium distachyon	31.88	1.00e-21	97.80
IUUC-Bol-015343	Brassica oleracea	37.50	1.00e-22	101.00
IUUC-Bra-016787	Brassica rapa	37.11	3.00e-22	99.40
IUUC-Cel-018154	Caenorhabditis elegans	32.41	2.00e-28	120.00
IUUC-Cja-019364	Callithrix jacchus	91.55	0.00e+00	1162.00
IUUC-Cfa-021166	Canis familiaris	90.18	0.00e+00	1273.00
IUUC-Cpo-021678	Cavia porcellus	81.57	0.00e+00	970.00
IUUC-Csa-023299	Chlorocebus sabaeus	91.13	0.00e+00	1371.00
IUUC-Cho-024694	Choloepus hoffmanni	93.38	2.00e-135	476.00
IUUC-Cin-025191	Ciona intestinalis	41.38	6.00e-44	170.00
IUUC-Csv-026348	Ciona savignyi	52.94	2.00e-12	63.50
IUUC-Dre-028715	Danio rerio	47.04	7.00e-161	560.00
IUUC-Dno-030091	Dasypus novemcinctus	87.23	0.00e+00	1308.00
IUUC-Dor-030807	Dipodomys ordii	80.34	0.00e+00	997.00
IUUC-Dme-031770	Drosophila melanogaster	32.19	5.00e-42	166.00
IUUC-Ete-032507	Echinops telfairi	68.30	0.00e+00	689.00
IUUC-Eca-033406	Equus caballus	90.58	0.00e+00	1037.00
IUUC-Eeu-034600	Erinaceus europaeus	80.18	0.00e+00	971.00
IUUC-Fca-035916	Felis catus	90.82	0.00e+00	1303.00
IUUC-Fal-036658	Ficedula albicollis	73.69	0.00e+00	991.00
IUUC-Gmo-038974	Gadus morhua	56.22	2.00e-102	366.00
IUUC-Gga-040195	Gallus gallus	74.93	0.00e+00	1075.00
IUUC-Gac-042537	Gasterosteus aculeatus	46.82	6.00e-164	571.00
IUUC-Gma-044234	Glycine max	35.57	4.00e-25	108.00
IUUC-Ggo-044715	Gorilla gorilla	90.81	0.00e+00	1201.00
IUUC-Hsa-045814	Homo sapiens	92.07	0.00e+00	1384.00
IUUC-Hvu-047365	Hordeum vulgare	31.58	8.00e-17	81.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	90.82	0.00e+00	1315.00
IUUC-Lch-050393	Latimeria chalumnae	61.84	0.00e+00	824.00
IUUC-Lpe-050691	Leersia perrieri	35.44	3.00e-21	96.30
IUUC-Loc-052859	Lepisosteus oculatus	58.94	0.00e+00	726.00
IUUC-Laf-053953	Loxodonta africana	87.75	0.00e+00	855.00
IUUC-Mcc-055846	Macaca mulatta	90.96	0.00e+00	1345.00
IUUC-Meu-056790	Macropus eugenii	69.48	0.00e+00	855.00
IUUC-Mtr-058749	Medicago truncatula	36.79	1.00e-21	97.80
IUUC-Mla-058959	Melampsora laricipopulina	39.71	2.00e-06	46.20
IUUC-Mga-059656	Meleagris gallopavo	74.06	0.00e+00	987.00
IUUC-Mmr-061089	Microcebus murinus	93.63	0.00e+00	1314.00
IUUC-Mdo-063043	Monodelphis domestica	69.19	0.00e+00	759.00
IUUC-Mmu-063654	Mus musculus	83.47	0.00e+00	1184.00
IUUC-Mac-064947	Musa acuminata	35.11	9.00e-21	94.40
IUUC-Mpu-066115	Mustela putorius furo	90.21	0.00e+00	1046.00
IUUC-Mlu-066974	Myotis lucifugus	85.31	0.00e+00	1177.00
IUUC-Nle-069184	Nomascus leucogenys	91.40	0.00e+00	1374.00
IUUC-Opr-070770	Ochotona princeps	80.80	0.00e+00	1031.00
IUUC-Ont-072040	Oreochromis niloticus	50.76	3.00e-142	499.00
IUUC-Oan-073448	Ornithorhynchus anatinus	81.48	8.00e-69	252.00
IUUC-Ocu-074405	Oryctolagus cuniculus	91.80	0.00e+00	1335.00
IUUC-Oba-075977	Oryza barthii	30.05	2.00e-14	72.80
IUUC-Obr-076298	Oryza brachyantha	30.84	2.00e-19	89.70
IUUC-Ogl-077706	Oryza glaberrima	30.52	2.00e-14	73.60
IUUC-Ogu-078381	Oryza glumaepatula	29.72	4.00e-15	75.50
IUUC-Oin-080150	Oryza indica	30.88	7.00e-15	75.10
IUUC-Ome-081153	Oryza meridionalis	30.28	4.00e-14	72.40
IUUC-Oni-083115	Oryza nivara	30.41	2.00e-14	73.20
IUUC-Opu-083860	Oryza punctata	31.16	1.00e-19	91.30
IUUC-Oru-084859	Oryza rufipogon	30.88	1.00e-14	74.30
IUUC-Osa-085567	Oryza sativa	30.88	2.00e-13	70.50
IUUC-Ola-087049	Oryzias latipes	48.05	2.00e-173	602.00
IUUC-Oar-090096	Ovis aries	89.45	0.00e+00	1304.00
IUUC-Ptr-090974	Pan troglodytes	91.24	0.00e+00	1210.00
IUUC-Pan-092657	Papio anubis	90.73	0.00e+00	1368.00
IUUC-Psi-093113	Pelodiscus sinensis	74.73	0.00e+00	951.00
IUUC-Ppa-095466	Physcomitrella patens	37.93	3.00e-23	102.00
IUUC-Pfo-096631	Poecilia formosa	47.93	9.00e-169	587.00
IUUC-Pab-098070	Pongo abelii	91.40	0.00e+00	1375.00
IUUC-Pop-099235	Populus trichocarpa	35.43	3.00e-22	99.80
IUUC-Pca-101032	Procavia capensis	81.87	0.00e+00	1055.00
IUUC-Ppe-101793	Prunus persica	32.35	4.00e-23	102.00
IUUC-Pva-102290	Pteropus vampyrus	89.55	0.00e+00	1155.00
IUUC-Rno-105080	Rattus norvegicus	82.49	0.00e+00	988.00
IUUC-Sha-107598	Sarcophilus harrisii	78.88	0.00e+00	1118.00
IUUC-Sit-110735	Setaria italica	30.26	3.00e-19	89.70
IUUC-Sly-111126	Solanum lycopersicum	40.79	1.00e-20	94.00
IUUC-Stu-112780	Solanum tuberosum	35.48	9.00e-25	107.00
IUUC-Sar-113418	Sorex araneus	87.12	0.00e+00	1090.00
IUUC-Sbi-113925	Sorghum bicolor	31.28	1.00e-20	94.00
IUUC-Sre-114917	Sporisorium reilianum	38.55	3.00e-07	49.70
IUUC-Ssc-115712	Sus scrofa	90.20	0.00e+00	1335.00
IUUC-Tgu-117148	Taeniopygia guttata	75.10	0.00e+00	1046.00
IUUC-Tru-117831	Takifugu rubripes	48.35	2.00e-166	579.00
IUUC-Tsy-118917	Tarsius syrichta	88.79	0.00e+00	1099.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.73	3.00e-162	565.00
IUUC-Tca-121430	Theobroma cacao	36.53	5.00e-09	55.50
IUUC-Tae-123752	Triticum aestivum	34.92	3.00e-16	79.30
IUUC-Tur-126238	Triticum urartu	32.63	4.00e-16	78.60
IUUC-Ttr-128615	Tursiops truncatus	84.31	0.00e+00	1065.00
IUUC-Vpa-130531	Vicugna pacos	90.94	0.00e+00	1179.00
IUUC-Vvi-131607	Vitis vinifera	37.29	5.00e-17	82.00
IUUC-Xtr-132787	Xenopus tropicalis	58.48	0.00e+00	749.00
IUUC-Xma-133815	Xiphophorus maculatus	48.16	2.00e-168	586.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence