iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076726

Ensembl Protein ID

OB01G19910.1

UniProt Accession

J3KYD5; J3KYD5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G19910	OB01G19910.1	OB01G19910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-28	97.1	445	478
UBD/Beta-Prp	3.20e-47	161.8	403	650

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlr 31
           H+++v+++af  ++  l +v+++dD  ikvWD++
   Q: 445  HSGGVNDIAFsrPNkQLcVVTCGDDRLIKVWDMH 478
           9**********9774334799***********75 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
            i+ v++spd++l+ ++++ + i ++ +++++    + ++  h+++v+++ fs+  k    vt+++Dr+ikvwd+   k + +++ghe+ v+s+  +
   Q: 403  SINRVAWSPDGDLIGVAFTKHLIHLHAYQQPNEtrqVLEIDAHSGGVNDIAFSRPNKqlCVVTCGDDRLIKVWDMHGQKLF-SFEGHEAPVYSICPH 498
           577799*************************99777777899***********98888999**************977765.79*********8887 PP
   S: 104  p..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
              + +++ s+s d  i+ w  ++     + +++  ++ +++ ++ dg  l+s+++    D+ +  W+ + g++ rt +g  ++s   ++fd  +++
   Q: 499  HkeTIQFIFSTSLDGKIKAWLYDHMGSRVDYDAP-GKWYTTMLYSADGTRLFSCGTskdgDSYLVEWNESEGSIKRTYSGFRKKSAGVVQFDTAQNH 594
           76455**************988776666645555.5699999999999999998763433556666888**************************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiri 248
           ++++++d+++k+wd+ +++++ + ++    +   ++rf +++++l+++++D+  +i
   Q: 595  ILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGlpRLRFNKEGNLLAVTTMDNGFKI 650
           *********************999998866542268888************98887 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEEKVHAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRHDR AKAVDILVKD LKVFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTTCTCTC TCCTCTCTCC CTCTCTCTCT CGACCTCCTC TCTTCCTCCT TCCAAATCTC 60
TCTCTCTCTC TCTTCACGAG AGCGAGCGGG GGCGGCGACG ACGGGGAAAC CCTAGAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

obr:102719903

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	80.79	0.00e+00	1786.00
IUUC-Aly-005503	Arabidopsis lyrata	70.04	0.00e+00	1607.00
IUUC-Ath-006901	Arabidopsis thaliana	70.92	0.00e+00	1627.00
IUUC-Bdi-014677	Brachypodium distachyon	87.48	0.00e+00	2003.00
IUUC-Bol-016487	Brassica oleracea	69.49	0.00e+00	1567.00
IUUC-Bra-016798	Brassica rapa	69.22	0.00e+00	1563.00
IUUC-Gma-042940	Glycine max	73.66	0.00e+00	1712.00
IUUC-Hvu-047370	Hordeum vulgare	87.30	0.00e+00	2036.00
IUUC-Lpe-050951	Leersia perrieri	93.68	0.00e+00	2064.00
IUUC-Mtr-058168	Medicago truncatula	73.18	0.00e+00	1724.00
IUUC-Mac-064660	Musa acuminata	76.12	0.00e+00	1717.00
IUUC-Oba-075415	Oryza barthii	94.78	0.00e+00	2181.00
IUUC-Ogl-077810	Oryza glaberrima	94.78	0.00e+00	2181.00
IUUC-Ogu-078090	Oryza glumaepatula	94.78	0.00e+00	2181.00
IUUC-Oin-080158	Oryza indica	93.89	0.00e+00	2161.00
IUUC-Olo-080271	Oryza longistaminata	92.84	0.00e+00	2128.00
IUUC-Ome-081965	Oryza meridionalis	94.69	0.00e+00	2177.00
IUUC-Oni-082421	Oryza nivara	94.61	0.00e+00	2179.00
IUUC-Opu-083912	Oryza punctata	95.05	0.00e+00	2191.00
IUUC-Oru-085201	Oryza rufipogon	94.78	0.00e+00	2181.00
IUUC-Osa-086161	Oryza sativa	94.78	0.00e+00	2181.00
IUUC-Pop-099188	Populus trichocarpa	72.86	0.00e+00	1675.00
IUUC-Ppe-102061	Prunus persica	71.67	0.00e+00	1681.00
IUUC-Sit-110487	Setaria italica	89.06	0.00e+00	2048.00
IUUC-Sly-111169	Solanum lycopersicum	73.37	0.00e+00	1709.00
IUUC-Stu-112369	Solanum tuberosum	73.20	0.00e+00	1706.00
IUUC-Sbi-113873	Sorghum bicolor	88.26	0.00e+00	2043.00
IUUC-Tca-121579	Theobroma cacao	72.82	0.00e+00	1614.00
IUUC-Tae-125707	Triticum aestivum	86.84	0.00e+00	2024.00
IUUC-Tur-126477	Triticum urartu	82.10	0.00e+00	1989.00
IUUC-Vvi-131297	Vitis vinifera	74.71	0.00e+00	1715.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence