iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126475

Ensembl Protein ID

TRIUR3_24167-P1

UniProt Accession

M7YQS9; M7YQS9_TRIUA

Genbank Protein ID

EMS49792.1

Protein Name

Cullin-1

Genbank Nucleotide ID

KD239742

Gene Name

TRIUR3_24167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24167	TRIUR3_24167-T1	TRIUR3_24167-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	5.40e-128	429.1	134	552

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 58   eesedeqlLktynreWekfreqlkvlrkifayldrtyvkkskkvsevrkLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvve 151
            e++de +L+ +++ W +++  +  l + f yldr+++++ +++   r+++l  +r+ + ++ik ++  +++ li +eR+ge++dr ll++v  
   Q: 134  REKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISR-RSLPALREVGLSCFRDLVYQEIKGKVKSAVISLIDQEREGEQIDRALLKNVLD 226
           6778899*********************************.9**************************************************** PP
   S: 152  slveLslnklaiykesFEakfleatqefykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll....a 241
            +ve++l + + y+++FE   l+ t+ +y+ +++  + e ++ +Y+ k+e+ l+ e+er+a+yl++s+e kLle+v++el+++++ +ll    +
   Q: 227  IFVEIGLGSMECYENDFEDFLLKDTADYYSIKAQTWIVEDSCPDYMLKAEECLKREKERVAHYLHSSSEPKLLEKVQHELLTQYASQLLekehS 320
           ****************************************************************************************999999 PP
   S: 242  elvallrdkktedlsrmykLlsrvlngleellkeleshikeqgkaaltaeekek.............dpkkyVerllelknklqklvseaFnnd 322
           +++allrd+k edlsrmy+L+sr++ gle++ + +++h+ ++g+a++ ++e +              + + +V++++el++k+   v  +F+  
   Q: 321  GCHALLRDDKVEDLSRMYRLFSRITRGLEPVSQIFKQHVTNEGTALVKQAEDAAsnkkpekkdivglQEQVFVRKIIELHDKYVAYVTDCFQGH 414
           ************************************************544444467899999***9779************************ PP
   S: 323  akFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks.skglteeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaE 415
           + F kal++afe f nk   ++ + s+EllA ++D+ L+k+ s +l +e +e++l+kv+ ++ yis+kd+F ++Y+k La+RLl +ksa +e E
   Q: 415  TLFHKALKEAFEVFCNKG--VSGSSSAELLATFCDNILKKGgSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHE 506
           ******************..88999********************************************************************* PP
   S: 416  esviekLkeecgaeftskLerMfqdlkvSedlnrqFkeekenteesesvel 466
           +s+++kLk++cg +ftsk+e+M++dl v +d +++F+e      +s+++el
   Q: 507  RSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEE-----FISTHPEL 552
           ************************************93.....33333333 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MTTHERKTVD LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD 60
YSQQLYDKYR ESFEEYISSM VSSRVFRVLI VVGAPLILAV GLDEPRGVGG HLSFDVHTVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACGC ACGAGCGGAA GACCGTCGAT CTGGAGGAAG GCTGGGCCTT CATGCAGAAG 60
GGCATCACCA AGCTCAAGAA CATCCTCGAG GGCAAGCCGG AGCCGCAGTT CAGCTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002822	Amborella trichopoda	74.91	0.00e+00	1202.00
IUUC-Aly-005410	Arabidopsis lyrata	72.16	0.00e+00	1152.00
IUUC-Ath-006626	Arabidopsis thaliana	72.16	0.00e+00	1148.00
IUUC-Bdi-014240	Brachypodium distachyon	88.07	0.00e+00	1389.00
IUUC-Bol-016015	Brassica oleracea	71.91	0.00e+00	1148.00
IUUC-Bra-017658	Brassica rapa	71.54	0.00e+00	1139.00
IUUC-Cme-027277	Cyanidioschyzon merolae	25.37	2.00e-65	243.00
IUUC-Gma-044070	Glycine max	76.77	0.00e+00	1231.00
IUUC-Hvu-047383	Hordeum vulgare	89.57	0.00e+00	1412.00
IUUC-Lpe-051606	Leersia perrieri	84.75	0.00e+00	1326.00
IUUC-Mtr-057953	Medicago truncatula	75.78	0.00e+00	1210.00
IUUC-Mac-065440	Musa acuminata	78.63	0.00e+00	1260.00
IUUC-Oba-075744	Oryza barthii	85.59	0.00e+00	1352.00
IUUC-Obr-076289	Oryza brachyantha	84.99	0.00e+00	1315.00
IUUC-Ogl-077127	Oryza glaberrima	84.72	0.00e+00	1334.00
IUUC-Ogu-078249	Oryza glumaepatula	85.08	0.00e+00	1348.00
IUUC-Oin-079171	Oryza indica	80.87	0.00e+00	1288.00
IUUC-Olo-080532	Oryza longistaminata	85.20	0.00e+00	1349.00
IUUC-Ome-081358	Oryza meridionalis	85.20	0.00e+00	1349.00
IUUC-Oni-082083	Oryza nivara	85.20	0.00e+00	1349.00
IUUC-Opu-083214	Oryza punctata	85.96	0.00e+00	1357.00
IUUC-Oru-085124	Oryza rufipogon	85.20	0.00e+00	1349.00
IUUC-Osa-085572	Oryza sativa	85.84	0.00e+00	1356.00
IUUC-Olu-087721	Ostreococcus lucimarinus	50.00	0.00e+00	760.00
IUUC-Ppa-095910	Physcomitrella patens	72.32	0.00e+00	1137.00
IUUC-Pop-100087	Populus trichocarpa	77.89	0.00e+00	1216.00
IUUC-Ppe-101405	Prunus persica	77.02	0.00e+00	1243.00
IUUC-Smo-109541	Selaginella moellendorffii	72.08	0.00e+00	1092.00
IUUC-Sit-110566	Setaria italica	91.73	0.00e+00	1206.00
IUUC-Sly-111067	Solanum lycopersicum	77.56	0.00e+00	1239.00
IUUC-Stu-112374	Solanum tuberosum	72.59	0.00e+00	1109.00
IUUC-Sbi-114502	Sorghum bicolor	85.71	0.00e+00	1361.00
IUUC-Tca-121586	Theobroma cacao	77.39	0.00e+00	1211.00
IUUC-Tae-125618	Triticum aestivum	86.43	0.00e+00	1395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence