iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114812

UUCD1 version

UUC-SoB-01195

Ensembl Protein ID

Sb03g025310.1

UniProt Accession

A0A1B6Q485; A0A1B6Q485_SORBI

Genbank Protein ID

KXG32724.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G188300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g025310	Sb03g025310.1	Sb03g025310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-08	35.9	1110	1155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C vC + ++d    + C+ C+e++H  C  +   +++p+ + w+C++C+
   Q: 1110 CRVCLSDKDDH-LTILCDGCDEAYHLYCITPR-RTSVPKGH-WYCSSCS 1155
           *****998865.799*****************.*******8.******7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDEGGSQGIK KVHFRDSSSQ HPIVTYKRRR QQKPQTQQQL PQSPPPQQHQ PEPQPLQQVE 60
PQPQVEPEPN AGDVPAQQSK DTFWKSRDMG WKYGIMIDEN RQHWKCMYCG LIRHGGGVSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCTCCTCC TCCCCAACTA GTCTCTTGTA TCCAACCTTC ATTGCCGCAG TTCCATTTCA 60
CATCCCCTCC TCTCCATTTC CACCCCCTCC CATGGCCTGA ATTCGGAGGC CCCCGCCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003656--Znf_BED
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50808--ZF_BED
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF00628--PHD
PF02892--zf-BED

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	58.26	2.00e-143	502.00
IUUC-Afu-008965	Aspergillus fumigatus	43.14	3.00e-08	53.10
IUUC-Bdi-014359	Brachypodium distachyon	54.73	0.00e+00	872.00
IUUC-Bol-016145	Brassica oleracea	32.63	6.00e-51	194.00
IUUC-Bra-017951	Brassica rapa	31.57	5.00e-45	174.00
IUUC-Gma-044138	Glycine max	33.71	9.00e-60	223.00
IUUC-Hvu-047708	Hordeum vulgare	54.76	5.00e-176	609.00
IUUC-Lpe-051599	Leersia perrieri	52.58	0.00e+00	1103.00
IUUC-Oba-075869	Oryza barthii	54.80	0.00e+00	1176.00
IUUC-Obr-076535	Oryza brachyantha	55.28	0.00e+00	1196.00
IUUC-Ogl-077688	Oryza glaberrima	61.67	4.00e-126	443.00
IUUC-Ogu-078065	Oryza glumaepatula	54.97	0.00e+00	1177.00
IUUC-Oin-079589	Oryza indica	53.13	0.00e+00	1118.00
IUUC-Olo-081075	Oryza longistaminata	52.37	0.00e+00	984.00
IUUC-Oni-082357	Oryza nivara	54.84	0.00e+00	1163.00
IUUC-Opu-083175	Oryza punctata	54.78	0.00e+00	1169.00
IUUC-Oru-085009	Oryza rufipogon	53.01	0.00e+00	1134.00
IUUC-Ppa-095646	Physcomitrella patens	27.01	2.00e-15	78.20
IUUC-Sit-110347	Setaria italica	74.57	0.00e+00	1689.00
IUUC-Tae-125487	Triticum aestivum	52.26	0.00e+00	904.00
IUUC-Tur-126568	Triticum urartu	57.75	9.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence