iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131550

UUCD1 version

UUC-ViV-00409

Ensembl Protein ID

VIT_17s0000g03950.t01

UniProt Accession

F6GTJ4; F6GTJ4_VITVI

Genbank Protein ID

CCB43203.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594950

Gene Name

SCD1; VIT_17s0000g03950

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g03950	VIT_17s0000g03950.t01	VIT_17s0000g03950.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-32	108.7	958	995
UBD/Beta-Prp	1.00e-54	186.3	971	1210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH + v+c++  s+ +++++++Dgt+k+WD+rt++++ 
   Q: 958  GHDGQVSCVRMlSGERVLTAAHDGTVKMWDVRTDTCVA 995
           8*********98889********************985 PP

UBD/Beta-Prp

   S: 22   ksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
           ++ ++t+  dgt+k wdv+t ++++++  ++++v ++++++++ il+ g++D+++++wd+++g ++h+l gh++ ++s+++    d
   Q: 971  GERVLTAAHDGTVKMWDVRTDTCVATVGRCSSAVLCMEYDDSTGILAAGGRDAVANIWDIRAGRQMHKLLGHTKWIRSIRMVG--D 1054
           67799****************************************************************************99..* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg..kllrtltgghtdsvyslsfdsn 191
           ++++Gs+d t+r+w ++ g+c   +l+ h g + cv++  +++ +++Gs+D+ +r+W  + g  ++++  t  h+ ++ s++  + 
   Q: 1055 TVITGSDDWTARMWSVSRGTCDA-VLACHAGPILCVEYLMSDRGIITGSTDGLLRFWENEEGglRCVKNVTI-HNAPILSVNAGE- 1137
           **********************9.***********************************8875679999997.999999999666. PP
   S: 192  gkelvsgsldgtvklwdlqtgec...............vrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
              l  g+ d++  l+   +++                 rt +   + v++v+ + + +r+ sg+  g +r+W 
   Q: 1138 -HWLGIGAADNSMSLFHRPQERLggfsstgskmagwqlYRTPQRTVALVRCVASDLERKRICSGGRNGLLRLWE 1210
           .5677777777777777663333333333333445444555555558888888888888888888888888884 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAGIFEYFVV CGLGPEVRTL DGNKGFHGMG VMYLSSLLDQ YPPSNHSLYP PPPPQLPTCV 60
LPAGVEFYSS GFDSNDVSTF PRSYPIVLTE GDGSKIYVSC IAFRDPVSDD IAEAYRIPPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGATCCAAG AATCATCGAT CAGCAAATGG CTGGGATCTT CGAGTACTTC GTGGTGTGTG 60
GGCTTGGTCC GGAGGTCCGA ACCCTAGACG GCAACAAGGG CTTCCATGGA ATGGGCGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

KEGG

vvi:100254135

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	80.76	0.00e+00	1884.00
IUUC-Aly-005508	Arabidopsis lyrata	76.27	0.00e+00	1813.00
IUUC-Ath-007614	Arabidopsis thaliana	76.11	0.00e+00	1850.00
IUUC-Acl-008123	Aspergillus clavatus	30.43	6.00e-26	111.00
IUUC-Afl-008730	Aspergillus flavus	30.87	2.00e-26	114.00
IUUC-Bdi-014863	Brachypodium distachyon	73.91	0.00e+00	1782.00
IUUC-Bol-015997	Brassica oleracea	76.27	0.00e+00	1809.00
IUUC-Bra-017065	Brassica rapa	76.27	0.00e+00	1810.00
IUUC-Ggr-039781	Gaeumannomyces graminis	30.35	3.00e-28	119.00
IUUC-Gma-042682	Glycine max	83.29	0.00e+00	2013.00
IUUC-Hvu-047377	Hordeum vulgare	81.65	1.00e-159	554.00
IUUC-Lpe-051109	Leersia perrieri	73.65	0.00e+00	1694.00
IUUC-Mor-057076	Magnaporthe oryzae	34.18	2.00e-27	116.00
IUUC-Mpo-057423	Magnaporthe poae	30.35	1.00e-27	117.00
IUUC-Mtr-058651	Medicago truncatula	82.15	0.00e+00	1985.00
IUUC-Mac-065420	Musa acuminata	78.83	0.00e+00	1896.00
IUUC-Oba-075961	Oryza barthii	70.88	0.00e+00	1338.00
IUUC-Obr-076806	Oryza brachyantha	74.90	0.00e+00	1813.00
IUUC-Ogu-078716	Oryza glumaepatula	70.31	0.00e+00	1635.00
IUUC-Oin-079809	Oryza indica	61.87	0.00e+00	1332.00
IUUC-Olo-080386	Oryza longistaminata	70.64	0.00e+00	1704.00
IUUC-Ome-081107	Oryza meridionalis	72.37	0.00e+00	1715.00
IUUC-Oni-082213	Oryza nivara	68.43	0.00e+00	1581.00
IUUC-Opu-083850	Oryza punctata	69.06	0.00e+00	1561.00
IUUC-Oru-084982	Oryza rufipogon	73.08	0.00e+00	1660.00
IUUC-Osa-086141	Oryza sativa	75.00	0.00e+00	1779.00
IUUC-Olu-087744	Ostreococcus lucimarinus	33.97	1.00e-41	164.00
IUUC-Ppa-095259	Physcomitrella patens	53.48	0.00e+00	1280.00
IUUC-Pop-099233	Populus trichocarpa	86.42	0.00e+00	2065.00
IUUC-Ppe-101883	Prunus persica	83.48	0.00e+00	1626.00
IUUC-Sja-107764	Schizosaccharomyces japonicus	25.84	7.00e-25	108.00
IUUC-Smo-109566	Selaginella moellendorffii	59.13	0.00e+00	1438.00
IUUC-Sit-109736	Setaria italica	75.31	0.00e+00	1829.00
IUUC-Sly-111483	Solanum lycopersicum	83.47	0.00e+00	2011.00
IUUC-Sbi-113820	Sorghum bicolor	75.56	0.00e+00	1830.00
IUUC-Tca-121657	Theobroma cacao	85.60	0.00e+00	2028.00
IUUC-Tae-124598	Triticum aestivum	72.70	0.00e+00	1794.00
IUUC-Tur-126080	Triticum urartu	70.91	0.00e+00	1142.00
IUUC-Tme-127021	Tuber melanosporum	31.14	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence