iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s11260	POPTR_0011s11260.1	POPTR_0011s11260.1
POPTR_0011s11260	POPTR_0011s11260.2	POPTR_0011s11260.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.30e-48	164.6	9	140

Active Site

Position(s)	Description	Evidence
89	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ ke+++l ++p +gisa+p+++ ++  ++v+ilGp+++pYeggvFkle+ +pe+YP+ +Pkv+fltki+hPn+++ G++Cl+ilk  +k
   Q: 9    RIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK--DK 96
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykk 135
           Wspal++++vllsiq+ll+ pnp++pl e++a+++k+n++e  +
   Q: 97   WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVE 140
           **************************************987655 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL 60
PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATCTACCA AACAACGCCT TAAAATAGTT TCAACGTATC GTGTTCCGTG AGAGAATAAG 60
CAAAAAAAGG AAAGGAAAGC TCTTCTCTCT CGCTCTAAAA AACCCTTAAG AAAAGTAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0011s11260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007837	Ashbya gossypii	77.05	1.00e-54	204.00
IUUC-Dor-030269	Dipodomys ordii	81.40	3.00e-62	229.00
IUUC-Itr-048778	Ictidomys tridecemlineatus	78.68	5.00e-63	231.00
IUUC-Opu-083130	Oryza punctata	96.48	3.00e-78	283.00
IUUC-Pma-094136	Petromyzon marinus	76.19	5.00e-36	141.00
IUUC-Tur-126865	Triticum urartu	85.09	9.00e-79	285.00
IUUC-Vpa-130221	Vicugna pacos	72.46	2.00e-56	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence