iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051595

Ensembl Protein ID

LPERR01G24420.1

UniProt Accession

A0A0D9V4T6; A0A0D9V4T6_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G24420	LPERR01G24420.1	LPERR01G24420.1
LPERR01G24420	LPERR01G24420.2	LPERR01G24420.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-20	70.8	339	369

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++v+c+++  +d +++++Gs D+++++WD
   Q: 339  HGGDVHCVDWnlHDvNYILTGSADNSVRMWD 369
           99**********999**************** PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MGPDHFVTRL FIRRRGHLRA GATRKGPEQS FSPHYRERDS EGSEVGAGGG GGGGGGQRAA 60
KGELEMKEKG GSRAAVDERY AQWKSLIPVL YDWFANHNLV WPSLSCRLRR LPTRITDGTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCCAG ACCACTTTGT TACTAGGCTG TTCATCCGAC GTTAGCCAAT GTGTAAATGG 60
GCTAAGCCCA CAGCACCGCC TCTGTTTCCA CCGCCCGCTC CTCTCTCTCT CTCTCCCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	81.90	0.00e+00	670.00
IUUC-Atr-003045	Amborella trichopoda	71.07	1.00e-174	605.00
IUUC-Aly-006131	Arabidopsis lyrata	69.81	0.00e+00	652.00
IUUC-Ath-007494	Arabidopsis thaliana	69.51	0.00e+00	654.00
IUUC-Bdi-014938	Brachypodium distachyon	83.41	0.00e+00	760.00
IUUC-Bol-015567	Brassica oleracea	71.37	0.00e+00	653.00
IUUC-Bra-017393	Brassica rapa	71.96	0.00e+00	655.00
IUUC-Gma-042982	Glycine max	71.74	0.00e+00	660.00
IUUC-Hvu-047149	Hordeum vulgare	88.03	7.00e-62	228.00
IUUC-Mtr-057993	Medicago truncatula	71.52	0.00e+00	655.00
IUUC-Mac-065523	Musa acuminata	75.98	7.00e-167	579.00
IUUC-Oba-075959	Oryza barthii	89.49	0.00e+00	766.00
IUUC-Obr-076021	Oryza brachyantha	90.50	0.00e+00	805.00
IUUC-Ogl-077211	Oryza glaberrima	89.20	0.00e+00	790.00
IUUC-Ogu-078314	Oryza glumaepatula	86.10	0.00e+00	718.00
IUUC-Oin-079269	Oryza indica	88.10	0.00e+00	777.00
IUUC-Olo-080631	Oryza longistaminata	77.69	0.00e+00	708.00
IUUC-Oni-082416	Oryza nivara	89.31	0.00e+00	772.00
IUUC-Opu-083571	Oryza punctata	79.84	0.00e+00	734.00
IUUC-Oru-084902	Oryza rufipogon	93.99	0.00e+00	822.00
IUUC-Osa-085579	Oryza sativa	88.10	0.00e+00	777.00
IUUC-Olu-087795	Ostreococcus lucimarinus	37.14	8.00e-67	247.00
IUUC-Ppa-095350	Physcomitrella patens	58.24	7.00e-150	523.00
IUUC-Pop-099098	Populus trichocarpa	70.17	0.00e+00	637.00
IUUC-Ppe-101724	Prunus persica	71.43	0.00e+00	639.00
IUUC-Sit-110597	Setaria italica	82.03	0.00e+00	704.00
IUUC-Sly-111411	Solanum lycopersicum	70.54	1.00e-179	622.00
IUUC-Stu-112285	Solanum tuberosum	69.43	3.00e-136	477.00
IUUC-Sbi-114341	Sorghum bicolor	82.25	0.00e+00	699.00
IUUC-Tca-121523	Theobroma cacao	72.40	0.00e+00	653.00
IUUC-Tae-125281	Triticum aestivum	84.11	0.00e+00	760.00
IUUC-Tur-126763	Triticum urartu	83.76	0.00e+00	681.00
IUUC-Vvi-131642	Vitis vinifera	71.49	0.00e+00	625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence