iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111411

Ensembl Protein ID

Solyc03g121580.2.1

UniProt Accession

K4BMV7; K4BMV7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g121580.2	Solyc03g121580.2.1	Solyc03g121580.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-26	91.5	288	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++ +c+++  +d +++++Gs D+t++++D
   Q: 288  HNADLHCVDWnpHDvNYILTGSADNTVRMFD 318
           999********9889***************9 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKDKTEKAGE QPPTVDERYT QWKSLVPVLY DWLANHNLLW PSLSCRWGPQ FEQATYKNRQ 60
RLYLSEQTDG SVPNTLVIAN CEVVKPRVAA AQHISQFNEE ARSPFVKKFK TIIHPGEVNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGTACCG TATACTGAAC TGTTGGTTGT ACTAAATTAA GAGCAGAGCA AAAAGGCGGG 60
AAAACGTGAG AGAATGAAGG ACAAAACGGA GAAAGCCGGA GAACAGCCGC CGACGGTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sly:101267299

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	75.17	0.00e+00	648.00
IUUC-Atr-003045	Amborella trichopoda	79.15	0.00e+00	719.00
IUUC-Aly-006131	Arabidopsis lyrata	78.19	0.00e+00	759.00
IUUC-Ath-007494	Arabidopsis thaliana	77.97	0.00e+00	759.00
IUUC-Bdi-014938	Brachypodium distachyon	77.73	0.00e+00	730.00
IUUC-Bol-015567	Brassica oleracea	79.19	0.00e+00	754.00
IUUC-Bra-017112	Brassica rapa	77.61	0.00e+00	762.00
IUUC-Gma-044151	Glycine max	82.02	0.00e+00	774.00
IUUC-Hvu-047149	Hordeum vulgare	75.17	7.00e-54	201.00
IUUC-Lpe-051595	Leersia perrieri	69.83	3.00e-176	610.00
IUUC-Mtr-057993	Medicago truncatula	81.21	0.00e+00	761.00
IUUC-Mac-065523	Musa acuminata	79.25	1.00e-179	621.00
IUUC-Oba-075959	Oryza barthii	69.57	0.00e+00	626.00
IUUC-Obr-076021	Oryza brachyantha	76.56	0.00e+00	711.00
IUUC-Ogl-077211	Oryza glaberrima	75.74	0.00e+00	705.00
IUUC-Ogu-078314	Oryza glumaepatula	65.53	4.00e-165	573.00
IUUC-Oin-079269	Oryza indica	77.22	0.00e+00	714.00
IUUC-Olo-080631	Oryza longistaminata	65.62	8.00e-179	619.00
IUUC-Oni-082416	Oryza nivara	71.49	0.00e+00	651.00
IUUC-Opu-083571	Oryza punctata	65.90	2.00e-167	581.00
IUUC-Oru-084902	Oryza rufipogon	70.64	0.00e+00	635.00
IUUC-Osa-085579	Oryza sativa	77.22	0.00e+00	714.00
IUUC-Olu-087795	Ostreococcus lucimarinus	38.41	3.00e-81	295.00
IUUC-Ppa-095350	Physcomitrella patens	62.42	1.00e-173	601.00
IUUC-Pop-099959	Populus trichocarpa	78.70	0.00e+00	740.00
IUUC-Ppe-101803	Prunus persica	79.91	0.00e+00	751.00
IUUC-Sit-110597	Setaria italica	78.02	0.00e+00	712.00
IUUC-Stu-112285	Solanum tuberosum	98.84	0.00e+00	710.00
IUUC-Sbi-114341	Sorghum bicolor	77.36	0.00e+00	705.00
IUUC-Tca-121523	Theobroma cacao	81.00	0.00e+00	760.00
IUUC-Tae-125672	Triticum aestivum	75.90	0.00e+00	712.00
IUUC-Tur-126763	Triticum urartu	74.94	0.00e+00	640.00
IUUC-Vvi-131642	Vitis vinifera	82.93	0.00e+00	758.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence