iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126535

Ensembl Protein ID

TRIUR3_06127-P1

UniProt Accession

M8ADC8; M8ADC8_TRIUA

Genbank Protein ID

EMS62810.1

Protein Name

E3 ubiquitin-protein ligase RNF5

Genbank Nucleotide ID

KD077060

Gene Name

TRIUR3_06127

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_06127	TRIUR3_06127-T1	TRIUR3_06127-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-09	37.0	51	92
E3 activity/RING/U-box	1.40e-06	29.0	47	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e+  + p+v++CgH+f+  Cl++w    n+ s++  CP+C+
   Q: 51   CNICFEMAGE-PVVTSCGHLFCWPCLYQW---LNVYSNHKECPVCK 92
           99******99.999***************...8899*********7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           + f C I +e+  +Pvv+++G+ +   ++ +wl   s++k+cPv++ ++te +++P 
   Q: 47   ATFECNICFEMAGEPVVTSCGHLFCWPCLYQWLnvYSNHKECPVCKGEVTEANITPI 103
           689******************************5546666***************97 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAIVSTRAVP VPHHEPTIDV VGDDKVTGNG VEVGASEESE ERGKSVATFE CNICFEMAGE 60
PVVTSCGHLF CWPCLYQWLN VYSNHKECPV CKGEVTEANI TPIYGRGNSC SDAEKAVDEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTATAG TTTCCACTCG AGGTAAATTG GTGAAAAAAC AGCTGTGGAT GAAAGGTCTA 60
CGGTTAAGCG GTTAGCGACC AGCTGTTAAC GTGACGCAGC ATGCCGTTCT TGCGCGGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000886	Aegilops tauschii	98.19	4.00e-171	592.00
IUUC-Atr-002678	Amborella trichopoda	37.81	4.00e-46	177.00
IUUC-Aly-006126	Arabidopsis lyrata	45.59	1.00e-32	133.00
IUUC-Ath-007143	Arabidopsis thaliana	44.85	3.00e-32	132.00
IUUC-Ago-007728	Ashbya gossypii	35.19	2.00e-08	52.00
IUUC-Bdi-014417	Brachypodium distachyon	75.92	5.00e-136	476.00
IUUC-Bol-015635	Brassica oleracea	45.52	2.00e-32	132.00
IUUC-Bra-017049	Brassica rapa	44.85	4.00e-32	131.00
IUUC-Cgl-026743	Colletotrichum gloeosporioides	36.11	3.00e-10	58.90
IUUC-Dno-029843	Dasypus novemcinctus	53.41	8.00e-24	102.00
IUUC-Fox-037977	Fusarium oxysporum	30.67	1.00e-07	50.80
IUUC-Gma-042913	Glycine max	48.91	2.00e-33	135.00
IUUC-Hvu-047402	Hordeum vulgare	87.43	3.00e-175	607.00
IUUC-Lpe-051486	Leersia perrieri	69.95	1.00e-122	432.00
IUUC-Mtr-057874	Medicago truncatula	53.10	8.00e-33	133.00
IUUC-Mac-064953	Musa acuminata	44.08	4.00e-67	248.00
IUUC-Oba-075745	Oryza barthii	71.69	1.00e-123	436.00
IUUC-Obr-076242	Oryza brachyantha	69.87	3.00e-123	434.00
IUUC-Ogl-077431	Oryza glaberrima	71.69	1.00e-123	436.00
IUUC-Ogu-078666	Oryza glumaepatula	71.95	5.00e-124	437.00
IUUC-Oin-079645	Oryza indica	71.69	1.00e-123	436.00
IUUC-Olo-080972	Oryza longistaminata	71.95	2.00e-125	441.00
IUUC-Oni-082132	Oryza nivara	71.69	1.00e-123	436.00
IUUC-Opu-083673	Oryza punctata	72.21	6.00e-120	424.00
IUUC-Oru-084822	Oryza rufipogon	71.69	1.00e-123	435.00
IUUC-Osa-085696	Oryza sativa	71.69	1.00e-123	436.00
IUUC-Ppa-095820	Physcomitrella patens	62.77	4.00e-32	131.00
IUUC-Ppe-101193	Prunus persica	47.55	2.00e-33	135.00
IUUC-Sre-115184	Sporisorium reilianum	34.48	1.00e-06	46.60
IUUC-Tca-121427	Theobroma cacao	46.75	6.00e-34	137.00
IUUC-Tae-125367	Triticum aestivum	99.74	0.00e+00	674.00
IUUC-Uma-129328	Ustilago maydis	26.74	8.00e-08	50.80
IUUC-Vvi-131195	Vitis vinifera	56.76	2.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence