iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006967

UUCD1 version

UUC-ArT-01493

Ensembl Protein ID

AT1G27910.1

UniProt Accession

Q9C7G1; Q0WLV7; PUB45_ARATH

Genbank Protein ID

AAG51474.1; AEE30890.1; AAM19837.1; AAO11637.1; BAF01900.1

Protein Name

U-box domain-containing protein 45; Plant U-box protein 45; RING-type E3 ubiquitin transferase PUB45

Genbank Nucleotide ID

AC069471; CP002684; AY094469; BT002721; AK230080

Gene Name

PUB45; At1g27910; F13K9.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G27910	AT1G27910.1	AT1G27910.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	18552232

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	3.60e-31	107.9	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l++  l+Pn+ +++li++wce+n++
   Q: 279  PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGV 351
           69********************************************************************987 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MDVNEVEENF FAPGDAKLHG KMCNALSVIY CKIMSIFPSL EAARPRSKSG IQALCSLHVV 60
LEKVKNILRH CTESSKLYLA ITGDSVVLKF EKAKSSLTDS LRRVEDIVQQ SIGSQLLEIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTGTGTA CTTGCGACCT TGCAATTGCC ACTCGCAAGT TTTGGCTTTA TTTTGACTTG 60
AGAAGAACTT CTCCTCTTTT TTTCTTTCAC TAAAATATTT ATTTTTATTT TCCTTCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0070696--F:transmembrane receptor protein serine/threonine kinase binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0016567--P:protein ubiquitination

KEGG

ath:AT1G27910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	55.12	0.00e+00	787.00
IUUC-Aly-005662	Arabidopsis lyrata	96.88	0.00e+00	1447.00
IUUC-Ago-007832	Ashbya gossypii	41.67	7.20e-02	32.00
IUUC-Bdi-014509	Brachypodium distachyon	54.29	0.00e+00	767.00
IUUC-Bol-015443	Brassica oleracea	89.36	0.00e+00	1356.00
IUUC-Bra-017668	Brassica rapa	90.79	0.00e+00	1390.00
IUUC-Hvu-047761	Hordeum vulgare	55.47	0.00e+00	770.00
IUUC-Lpe-051154	Leersia perrieri	54.38	0.00e+00	785.00
IUUC-Mla-058984	Melampsora laricipopulina	35.56	4.20e-02	32.70
IUUC-Obr-076068	Oryza brachyantha	54.64	0.00e+00	773.00
IUUC-Oin-079566	Oryza indica	55.31	0.00e+00	806.00
IUUC-Ome-081577	Oryza meridionalis	55.19	0.00e+00	805.00
IUUC-Opu-083186	Oryza punctata	55.20	0.00e+00	808.00
IUUC-Oru-084375	Oryza rufipogon	54.99	0.00e+00	796.00
IUUC-Sit-109865	Setaria italica	55.75	0.00e+00	817.00
IUUC-Sly-110840	Solanum lycopersicum	63.37	0.00e+00	913.00
IUUC-Stu-112347	Solanum tuberosum	63.72	0.00e+00	910.00
IUUC-Sbi-114310	Sorghum bicolor	54.91	0.00e+00	802.00
IUUC-Tae-123152	Triticum aestivum	55.73	0.00e+00	796.00
IUUC-Tur-126692	Triticum urartu	52.47	0.00e+00	672.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence