iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076773

Ensembl Protein ID

OB02G18800.1

UniProt Accession

J3LB63; J3LB63_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G18800	OB02G18800.1	OB02G18800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.10e-31	106.4	81	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           +vp+ef CpIsl+lMrdPvv+++G+tydr sI +w+++g++tcP  +q+l+++ lvPn +lr+li++wc 
   Q: 81   SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCG 150
           59*******************************************************************6 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGISSAASCR AEIDYLEEQI LSQEEDTDLP LVGSVVALLR YCLFALFNPG NTRALRDWPL 60
AGNRQRLLSF GGGGGDDTSF SVPKEFSCPI SLDLMRDPVV ASTGQTYDRP SIIQWIEEGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATCT CCTCAGCCGC CTCTTGCCGC GCAGAAATCG ATTACCTGGA AGAGCAAATC 60
TTGAGCCAAG AAGAGGACAC CGACCTCCCT CTCGTCGGCA GCGTCGTCGC CTTGCTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	84.11	2.00e-142	498.00
IUUC-Aly-006027	Arabidopsis lyrata	55.88	2.00e-89	322.00
IUUC-Ath-007054	Arabidopsis thaliana	55.70	5.00e-88	318.00
IUUC-Bdi-014675	Brachypodium distachyon	81.52	6.00e-133	467.00
IUUC-Bol-015901	Brassica oleracea	55.13	1.00e-86	313.00
IUUC-Bra-017296	Brassica rapa	53.38	7.00e-83	300.00
IUUC-Gma-042839	Glycine max	55.41	6.00e-86	311.00
IUUC-Hvu-047822	Hordeum vulgare	83.44	7.00e-141	493.00
IUUC-Lpe-051105	Leersia perrieri	90.07	9.00e-151	526.00
IUUC-Mtr-057764	Medicago truncatula	53.59	6.00e-88	317.00
IUUC-Mac-065609	Musa acuminata	57.28	1.00e-96	346.00
IUUC-Oba-075480	Oryza barthii	93.38	1.00e-167	582.00
IUUC-Ogl-077156	Oryza glaberrima	93.38	4.00e-167	580.00
IUUC-Ogu-078640	Oryza glumaepatula	93.71	5.00e-168	583.00
IUUC-Oin-079253	Oryza indica	87.09	3.00e-152	531.00
IUUC-Olo-080903	Oryza longistaminata	93.38	3.00e-167	580.00
IUUC-Ome-081982	Oryza meridionalis	93.71	4.00e-168	583.00
IUUC-Oni-082824	Oryza nivara	93.71	5.00e-168	583.00
IUUC-Opu-083758	Oryza punctata	94.37	4.00e-169	587.00
IUUC-Oru-084718	Oryza rufipogon	93.71	5.00e-168	583.00
IUUC-Osa-085662	Oryza sativa	93.71	3.00e-168	583.00
IUUC-Pop-099562	Populus trichocarpa	54.28	1.00e-90	326.00
IUUC-Ppe-101890	Prunus persica	56.54	2.00e-81	295.00
IUUC-Sit-110022	Setaria italica	85.10	3.00e-147	514.00
IUUC-Sly-111463	Solanum lycopersicum	55.74	8.00e-82	297.00
IUUC-Stu-111976	Solanum tuberosum	55.41	2.00e-81	296.00
IUUC-Sbi-114100	Sorghum bicolor	82.78	7.00e-143	499.00
IUUC-Tca-121221	Theobroma cacao	54.31	3.00e-89	322.00
IUUC-Tae-124437	Triticum aestivum	84.11	2.00e-142	498.00
IUUC-Tur-126627	Triticum urartu	84.30	2.00e-139	488.00
IUUC-Vvi-131159	Vitis vinifera	54.97	7.00e-81	294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence