iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121510

Ensembl Protein ID

EOY30314

UniProt Accession

A0A061GT61; A0A061GT61_THECC

Genbank Protein ID

EOY30314.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037571

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037571	EOY30314	EOY30314

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-09	38.4	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f+dg  ++ lp C+H fha C+ +w       + +f CPlCr
   Q: 100  CAVCLSIFEDGeeVRQLPrCKHSFHAPCIDMW------LYSHFDCPLCR 142
           ********66555999999*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGDTPGPSSP PLSPKSNLPM LYYGLVVVGT AAIVLAIYNL IIIRWCTQRR DESRQRPTRL 60
AELTAGQSFE NPSRNLLSSF KYRKESSNMG SQDPGGEYEC AVCLSIFEDG EEVRQLPRCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGATCCTTA CTATCTATTG TATTCGACTG TGTAAACATG AATACTAAAA AGTAACAACA 60
AACACCATTC TTCTTTTCTT TTTGGCTTAA AATCCAAAAT GATTTGTGCA TGGTACAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000752	Aegilops tauschii	38.18	5.00e-17	80.10
IUUC-Gma-043749	Glycine max	54.61	9.00e-37	145.00
IUUC-Mtr-058136	Medicago truncatula	54.90	4.00e-36	143.00
IUUC-Oba-075974	Oryza barthii	75.51	2.00e-18	84.70
IUUC-Ogl-077660	Oryza glaberrima	75.51	2.00e-18	84.70
IUUC-Oin-079128	Oryza indica	73.47	7.00e-18	82.80
IUUC-Ome-081917	Oryza meridionalis	75.51	1.00e-18	85.10
IUUC-Oni-083089	Oryza nivara	73.47	5.00e-18	86.30
IUUC-Opu-083849	Oryza punctata	73.47	1.00e-17	85.50
IUUC-Pop-098942	Populus trichocarpa	68.12	1.00e-58	218.00
IUUC-Ppe-102048	Prunus persica	58.06	7.00e-46	175.00
IUUC-Stu-112205	Solanum tuberosum	50.00	6.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence