iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114213

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G149300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g020030	Sb10g020030.1	Sb10g020030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	3.20e-56	189.7	5	139
UBD/UBC-like/UBD_UBC	6.00e-74	247.5	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspal
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVSIHFPPDYPFKPPKVAFKTKVFHPNINSNGSICLDILK--EQWSPAL 97
           899*********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +v++vllsi+sll++pnp++pl  e+a+++k++r +y++++r
   Q: 98   TVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRVKYESTAR 139
           **************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltls 96
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp+dspy ggvf + i++p dypfkppkvaf tk++hpninsngsicldil++qws+alt+s
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVSIHFPPDYPFKPPKVAFKTKVFHPNINSNGSICLDILKEQWSPALTVS 100
           899********************************************************************************************* PP
   S: 97   kvllslcslladaepddplvaeiariyktdkekykriarewt 138
           kvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 101  KVLLSICSLLTDPNPDDPLVPEIAHMYKTDRVKYESTARSWT 142
           *****************************************8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVSIHFPPDY 60
PFKPPKVAFK TKVFHPNINS NGSICLDILK EQWSPALTVS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCTTCCT GCTTCTCCTC TCCATCCAGT TGGATTGGGT TCGTTGGGCT TTCGGATAGC 60
TGTGGTGTGC ACGGCACGGC ACGGCAGTTC GGCTACTAGC GAGGAAGAGA GGAGGAGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_10g020030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002861	Amborella trichopoda	95.27	2.00e-83	299.00
IUUC-Aly-006364	Arabidopsis lyrata	96.62	2.00e-84	303.00
IUUC-Ath-007495	Arabidopsis thaliana	95.95	2.00e-83	300.00
IUUC-Bgr-012238	Blumeria graminis	80.27	8.00e-71	258.00
IUUC-Bdi-014712	Brachypodium distachyon	95.95	2.00e-83	300.00
IUUC-Bol-016243	Brassica oleracea	95.27	3.00e-83	299.00
IUUC-Bra-016748	Brassica rapa	95.27	2.00e-84	305.00
IUUC-Cin-025379	Ciona intestinalis	76.71	5.00e-67	245.00
IUUC-Csv-026311	Ciona savignyi	74.66	1.00e-64	237.00
IUUC-Cne-026957	Cryptococcus neoformans	76.71	3.00e-68	249.00
IUUC-Dno-028952	Dasypus novemcinctus	79.58	2.00e-68	250.00
IUUC-Gac-042516	Gasterosteus aculeatus	79.59	1.00e-69	254.00
IUUC-Lpe-050972	Leersia perrieri	97.30	1.00e-84	303.00
IUUC-Mtr-058257	Medicago truncatula	95.95	4.00e-84	301.00
IUUC-Oba-075411	Oryza barthii	96.62	8.00e-84	301.00
IUUC-Obr-076658	Oryza brachyantha	97.30	1.00e-84	303.00
IUUC-Ogl-077124	Oryza glaberrima	96.62	3.00e-84	302.00
IUUC-Ogu-078981	Oryza glumaepatula	96.62	8.00e-84	301.00
IUUC-Oin-080092	Oryza indica	96.62	3.00e-84	302.00
IUUC-Olo-080786	Oryza longistaminata	96.62	8.00e-84	301.00
IUUC-Oni-082720	Oryza nivara	96.62	8.00e-84	301.00
IUUC-Opu-083833	Oryza punctata	96.62	3.00e-84	302.00
IUUC-Oru-084481	Oryza rufipogon	96.62	8.00e-84	301.00
IUUC-Osa-086291	Oryza sativa	95.95	1.00e-83	300.00
IUUC-Ppa-095442	Physcomitrella patens	95.95	2.00e-83	299.00
IUUC-Smo-109317	Selaginella moellendorffii	94.59	6.00e-83	298.00
IUUC-Sit-109936	Setaria italica	96.62	8.00e-84	302.00
IUUC-Tca-121413	Theobroma cacao	96.62	8.00e-84	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence