iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110885

Ensembl Protein ID

Solyc08g008220.2.1

UniProt Accession

K4CIV6; K4CIV6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g008220.2	Solyc08g008220.2.1	Solyc08g008220.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	8.50e-56	188.3	5	139
UBD/UBC-like/UBD_UBC	4.70e-74	247.8	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ kelk+l+kdpp+++sa+pv e d+++w+++++Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQ 92
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k+++++y+ ++r
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYEATAR 139
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri kelkdl++d+++ +sa++v +d+f+++at++gp+dspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSP 95
           899**************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktdk ky+ +ar wt
   Q: 96   ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYEATARSWT 142
           **********************************************8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATLMGP SDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAAAACTC TGAAAAAAAA ATCAAAATTG AGTAGGAGGA TTTCTGAGGT ATGAAACAAT 60
TCAGCTTTCG TGTTTCAAAT TCTGATTGTT TTCTGTATAT ATGAGTTGTT ATACATGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

sly:101257090

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006230	Arabidopsis lyrata	97.30	2.00e-84	303.00
IUUC-Ath-007647	Arabidopsis thaliana	97.30	2.00e-84	303.00
IUUC-Lpe-050972	Leersia perrieri	96.62	4.00e-84	302.00
IUUC-Obr-076658	Oryza brachyantha	96.62	4.00e-84	302.00
IUUC-Ogl-077124	Oryza glaberrima	97.30	2.00e-84	303.00
IUUC-Oin-080092	Oryza indica	97.30	2.00e-84	303.00
IUUC-Opu-083833	Oryza punctata	97.30	2.00e-84	303.00
IUUC-Osa-086291	Oryza sativa	96.62	6.00e-84	301.00
IUUC-Pop-098878	Populus trichocarpa	97.97	3.00e-85	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence