iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095890

Ensembl Protein ID

PP1S150_95V6.1

UniProt Accession

A9T1I5; A9T1I5_PHYPA

Genbank Protein ID

EDQ62721.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545039

Gene Name

PHYPADRAFT_138854

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S150_95V6	PP1S150_95V6.1	PP1S150_95V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-08	35.9	178	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf...sdtllvsGsdDgtikvWDlrtgvll 36
           ++f   s+  l+sGs D+ +++W+  t  ++
   Q: 178  VRFhpaSSEVLASGSLDNEVRLWNANTAECV 208
           5556576699**************9888876 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRQFSYSAGL RFSHSRTGGL SMTLDHSQHV DYYAISPKHS FTNKIGPCIY AICMVHYRVG 60
NVTSLLAWRE VAPRVKRPAR RLWGEAASGI VVHAGPRLES ISAELALTSW LEAESLRHCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACAAT TTTCGTATTC AGCAGGGCTA AGATTTTCAC ATTCCAGGAC CGGAGGGTTG 60
TCGATGACGC TTGATCACTC ACAGGTCAGA AACACTAATA CCTTGTGTTC GTCTGCGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0006914--P:autophagy

KEGG

ppp:PHYPADRAFT_138854

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002557	Amborella trichopoda	48.13	4.00e-110	391.00
IUUC-Aly-005774	Arabidopsis lyrata	65.62	9.00e-94	337.00
IUUC-Ath-007656	Arabidopsis thaliana	64.18	5.00e-95	341.00
IUUC-Bdi-014580	Brachypodium distachyon	41.52	7.00e-93	334.00
IUUC-Bol-016094	Brassica oleracea	65.76	1.00e-91	330.00
IUUC-Bra-016621	Brassica rapa	66.15	1.00e-92	333.00
IUUC-Cin-025567	Ciona intestinalis	36.03	7.00e-22	98.20
IUUC-Dre-028282	Danio rerio	38.71	3.00e-27	117.00
IUUC-Mac-065308	Musa acuminata	46.03	1.00e-105	376.00
IUUC-Oba-075024	Oryza barthii	41.83	4.00e-94	338.00
IUUC-Obr-076172	Oryza brachyantha	42.03	6.00e-97	348.00
IUUC-Ogu-078025	Oryza glumaepatula	41.90	8.00e-94	338.00
IUUC-Oni-082463	Oryza nivara	41.90	9.00e-94	337.00
IUUC-Opu-084041	Oryza punctata	43.02	8.00e-96	344.00
IUUC-Oru-085075	Oryza rufipogon	41.90	3.00e-94	339.00
IUUC-Osa-085781	Oryza sativa	41.90	1.00e-94	340.00
IUUC-Olu-087735	Ostreococcus lucimarinus	54.45	1.00e-55	210.00
IUUC-Ppe-101411	Prunus persica	56.02	3.00e-106	379.00
IUUC-Sly-110859	Solanum lycopersicum	54.30	2.00e-100	359.00
IUUC-Stu-112031	Solanum tuberosum	54.72	2.00e-100	359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence