iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058052

Ensembl Protein ID

KEH24248

UniProt Accession

A0A072U521; A0A072U521_MEDTR

Genbank Protein ID

KEH24248.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g106340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g106340	KEH24248	KEH24248

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-32	111.9	7	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedl.vPnltlrrliqawceenss 74
           evp++f+CpIsle+M+dPv++++Gitydr+sIekwl s+++ tcPvt+q l + +dl +Pn+tlrrliqawc  n+s
   Q: 7    EVPSFFVCPISLEIMKDPVTVSTGITYDRESIEKWLFSKKNmTCPVTKQLLsDYTDLtTPNHTLRRLIQAWCTLNAS 83
           69**********************************888888*********6667889**************98875 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDHDEVEVPS FFVCPISLEI MKDPVTVSTG ITYDRESIEK WLFSKKNMTC PVTKQLLSDY 60
TDLTTPNHTL RRLIQAWCTL NASQGIERIP TPKPPINKTQ ITKLIKEASH SSLTVQLKCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCAAAAC TCAAAAAACC ATCACAACTA ATAATATAAT TCATTCTCTT ATCTTCTCTT 60
CCAGCCGCTT CATCTTTTAC CTAAAACTAC AAAGACTAAT CACTCGAGTT AGATATGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_7g106340

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	46.26	2.00e-90	325.00
IUUC-Atr-002430	Amborella trichopoda	50.00	6.00e-112	396.00
IUUC-Aly-005797	Arabidopsis lyrata	59.23	5.00e-138	483.00
IUUC-Ath-007272	Arabidopsis thaliana	59.23	1.00e-131	462.00
IUUC-Bdi-014627	Brachypodium distachyon	45.14	2.00e-93	335.00
IUUC-Bol-015372	Brassica oleracea	58.31	6.00e-138	483.00
IUUC-Bra-016912	Brassica rapa	58.31	6.00e-138	483.00
IUUC-Gma-043412	Glycine max	79.53	0.00e+00	665.00
IUUC-Hvu-047293	Hordeum vulgare	46.49	2.00e-91	328.00
IUUC-Lpe-051489	Leersia perrieri	42.52	1.00e-79	289.00
IUUC-Mac-065005	Musa acuminata	48.90	8.00e-104	369.00
IUUC-Oba-075095	Oryza barthii	43.58	1.00e-78	285.00
IUUC-Obr-076700	Oryza brachyantha	31.24	3.00e-41	162.00
IUUC-Ogl-077664	Oryza glaberrima	44.31	2.00e-79	288.00
IUUC-Ogu-079030	Oryza glumaepatula	42.47	2.00e-78	285.00
IUUC-Oin-079734	Oryza indica	42.47	5.00e-78	284.00
IUUC-Ome-081360	Oryza meridionalis	42.38	1.00e-75	276.00
IUUC-Oni-082818	Oryza nivara	42.02	2.00e-78	285.00
IUUC-Opu-083355	Oryza punctata	44.70	3.00e-85	308.00
IUUC-Oru-085239	Oryza rufipogon	42.47	2.00e-78	285.00
IUUC-Osa-086041	Oryza sativa	42.47	2.00e-78	285.00
IUUC-Ppa-095659	Physcomitrella patens	34.40	4.00e-62	231.00
IUUC-Pop-099765	Populus trichocarpa	66.11	3.00e-159	554.00
IUUC-Ppe-102059	Prunus persica	65.00	5.00e-155	540.00
IUUC-Smo-108988	Selaginella moellendorffii	38.99	4.00e-63	234.00
IUUC-Sit-110734	Setaria italica	46.59	5.00e-93	333.00
IUUC-Sly-110993	Solanum lycopersicum	63.86	2.00e-153	535.00
IUUC-Stu-112276	Solanum tuberosum	62.89	1.00e-150	525.00
IUUC-Sbi-114243	Sorghum bicolor	47.22	8.00e-96	343.00
IUUC-Tca-121107	Theobroma cacao	67.71	2.00e-158	551.00
IUUC-Tae-124641	Triticum aestivum	45.88	4.00e-96	344.00
IUUC-Tur-126719	Triticum urartu	42.79	8.00e-92	330.00
IUUC-Vvi-131052	Vitis vinifera	65.54	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence