iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051332

Ensembl Protein ID

LPERR02G15720.1

UniProt Accession

A0A0D9VGT6; A0A0D9VGT6_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR02G15720	LPERR02G15720.1	LPERR02G15720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-48	161.5	1006	1038
UBD/Beta-Prp	9.40e-70	236.0	239	536

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H + vtc++f   d ++++sGs Dg+++vWD++
   Q: 1006 HGNYVTCVQFnpVDeRYFISGSIDGKVRVWDVS 1038
           999********9666****************86 PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghe 94
           +++ +++hk+ i+++kfs ++ +la+g++d  +++w++++     sl+g++ +   ++ ++d k   +    D++  +    t ++++ ++gh+
   Q: 239  MCQEFQAHKGLIRVMKFSSSGWYLASGGEDCVVRIWQIKEIESTPSLYGKDTGAENMNNNKDVKnKALAIIPDKIFSI----TETPLQEFHGHT 328
           5888999********************************************999999888886668999999999998....************ PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           +++l+l++s+ +d+l++ s+d+tir+w++  + cl   l +h   v+cv+++p + ++++sGs D++vr+Wd++ ++l +      +d ++ +s
   Q: 329  SDILDLAWSK-SDFLLTSSKDNTIRMWKVGCDHCLA--LFKHVNYVTCVQFNPVDeRYFISGSIDGKVRIWDVSDKQLYDYYD--IKDIITAIS 417
           **********.9***********************6..99*********************************7777777774..79******* PP
   S: 188  fdsngkelvsgsldgtvklwdlq......tgec...vrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
           ++++gk +v g  +g+  +++ +      ++++    r   +  + ++ ++fs  n+ r++  s+D  ir+   +  +++++lq++ ss   v 
   Q: 418  YQPDGKGFVVGNVKGRCFFYNKSdryfgrSNKIrikRRNIFAAANKITNIQFSkGNSPRMIISSKDHKIRVS--EDLKITQKLQGKWSSKALVP 509
           **********************9888887444466788899999*********899***************6..899********988888887 PP
   S: 272  v.lsfgdnvlvlgsedskvniwklkkn 297
             l +++++l+++++dskv+iw+++ +
   Q: 510  PsLTPDGRYLISAGGDSKVRIWNFDDK 536
           789999*****************9866 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MPRSDSDGED VFFDACDDVI IRSSSELDSL SSVGCSTSED GYDLWAGELI SVKERRQRFL 60
RGMGFLEPGP PGTVFPQCLA EITTDCSFQD YEGTISSVCS SFRSCFSDNI SAMEDSVNCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAAGAT CAGATTCTGA TGGAGAAGAC GTCTTTTTTG ATGCGTGTGA CGATGTTATT 60
ATAAGAAGCT CAAGCGAGCT TGATTCTTTA TCATCAGTCG GTTGCAGCAC AAGTGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075905	Oryza barthii	64.58	0.00e+00	709.00
IUUC-Obr-076137	Oryza brachyantha	67.19	0.00e+00	733.00
IUUC-Ogl-077505	Oryza glaberrima	65.19	0.00e+00	723.00
IUUC-Ogu-078400	Oryza glumaepatula	65.80	0.00e+00	736.00
IUUC-Oin-079305	Oryza indica	65.50	0.00e+00	733.00
IUUC-Olo-080274	Oryza longistaminata	68.18	4.00e-180	624.00
IUUC-Ome-081649	Oryza meridionalis	64.98	0.00e+00	734.00
IUUC-Oni-082215	Oryza nivara	65.04	0.00e+00	731.00
IUUC-Opu-083729	Oryza punctata	64.64	0.00e+00	764.00
IUUC-Oru-084343	Oryza rufipogon	65.50	0.00e+00	731.00
IUUC-Osa-085866	Oryza sativa	66.04	3.00e-135	474.00
IUUC-Sit-109994	Setaria italica	51.17	0.00e+00	631.00
IUUC-Sbi-114508	Sorghum bicolor	48.04	4.00e-174	604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence