iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074186

UUCD1 version

UUC-OrC-00222

Ensembl Protein ID

ENSOCUP00000005055.2

UniProt Accession

G1SPS0; G1SPS0_RABIT

Protein Name

Uncharacterized protein

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000005834.2	ENSOCUT00000005834.2	ENSOCUP00000005055.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-32	109.0	107	142
UBD/Beta-Prp	1.50e-50	172.1	15	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSIRCWDCRSRR 142
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           +k +++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ ++s ++++l sG+ d+ + +wd+ +gq+++
   Q: 15   QKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAASSFDNSSLCSGGGDKAVVLWDVASGQVVR 103
           56677888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
             ++gh g vn+v++++++ ++ sGs D+ +r Wd   ++ + +++l +  +dsv s+++++   e+++gs dg+v+ +dl+ g+    
   Q: 104  -KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCrsRRPEPVQKLDE-AKDSVSSVKVSD--HEVLAGSVDGRVRRYDLRMGQLFSD 188
           .888888888888888888888888888888888886666778888887.888888888888..6888888888888888888776655 PP
   S: 218  l 218
           +
   Q: 189  Y 189
           5 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAFPEPKPRA PELPQKRVKT LDCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAASSFDNS SLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTTC CTGAGCCGAA GCCGCGGGCC CCCGAACTGC CGCAGAAGCG GGTGAAGACG 60
CTGGACTGCG GGCAGGGGGC CGTGCGGGCG GTGCGGTTTA ATGGTGAGCG CCTCCTTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ocu:100353499

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	93.95	5.00e-178	616.00
IUUC-Atr-002647	Amborella trichopoda	48.99	2.00e-89	322.00
IUUC-Aca-004948	Anolis carolinensis	78.91	8.00e-144	502.00
IUUC-Aly-006489	Arabidopsis lyrata	50.51	1.00e-82	299.00
IUUC-Ath-007099	Arabidopsis thaliana	50.84	1.00e-82	299.00
IUUC-Acl-008374	Aspergillus clavatus	36.67	4.00e-49	188.00
IUUC-Afl-008506	Aspergillus flavus	38.67	3.00e-52	199.00
IUUC-Afu-009098	Aspergillus fumigatus	33.84	1.00e-44	173.00
IUUC-Ang-009705	Aspergillus niger	33.87	4.00e-46	178.00
IUUC-Aor-010031	Aspergillus oryzae	38.67	3.00e-52	198.00
IUUC-Ame-011056	Astyanax mexicanus	70.79	3.00e-138	484.00
IUUC-Bgr-012109	Blumeria graminis	41.55	2.00e-56	212.00
IUUC-Bta-012476	Bos taurus	93.65	1.00e-177	615.00
IUUC-Bci-013860	Botrytis cinerea	35.81	3.00e-45	175.00
IUUC-Bdi-014565	Brachypodium distachyon	50.51	2.00e-88	318.00
IUUC-Bol-016204	Brassica oleracea	50.17	3.00e-82	298.00
IUUC-Bra-018093	Brassica rapa	50.51	6.00e-82	296.00
IUUC-Cel-018500	Caenorhabditis elegans	47.44	2.00e-82	298.00
IUUC-Cja-019279	Callithrix jacchus	93.65	3.00e-166	577.00
IUUC-Cfa-020516	Canis familiaris	93.97	9.00e-179	618.00
IUUC-Cpo-021427	Cavia porcellus	90.79	1.00e-164	571.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	46.49	1.00e-75	276.00
IUUC-Csa-023449	Chlorocebus sabaeus	93.33	4.00e-166	577.00
IUUC-Cin-025637	Ciona intestinalis	58.70	4.00e-108	384.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	36.89	3.00e-52	198.00
IUUC-Cne-026994	Cryptococcus neoformans	34.63	9.00e-49	187.00
IUUC-Dre-028239	Danio rerio	73.53	8.00e-131	459.00
IUUC-Dno-029408	Dasypus novemcinctus	91.75	7.00e-175	605.00
IUUC-Dor-030684	Dipodomys ordii	91.22	4.00e-110	390.00
IUUC-Dse-031344	Dothistroma septosporum	45.42	2.00e-53	202.00
IUUC-Dme-031634	Drosophila melanogaster	46.53	1.00e-75	276.00
IUUC-Ete-033126	Echinops telfairi	84.76	8.00e-158	549.00
IUUC-Eca-034356	Equus caballus	84.76	2.00e-153	534.00
IUUC-Eeu-035196	Erinaceus europaeus	92.31	9.00e-79	286.00
IUUC-Fca-036231	Felis catus	93.33	6.00e-178	616.00
IUUC-Fox-038076	Fusarium oxysporum	35.93	8.00e-55	207.00
IUUC-Fso-038093	Fusarium solani	34.72	7.00e-46	177.00
IUUC-Gmo-039056	Gadus morhua	71.38	1.00e-131	462.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.65	1.00e-43	170.00
IUUC-Gga-041042	Gallus gallus	77.71	8.00e-151	525.00
IUUC-Gac-042638	Gasterosteus aculeatus	72.22	1.00e-134	472.00
IUUC-Gma-042689	Glycine max	51.02	2.00e-90	325.00
IUUC-Ggo-044720	Gorilla gorilla	93.97	2.00e-167	580.00
IUUC-Hsa-046056	Homo sapiens	93.97	1.00e-167	582.00
IUUC-Hvu-047675	Hordeum vulgare	47.24	2.00e-85	309.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	92.76	2.00e-170	591.00
IUUC-Lch-050634	Latimeria chalumnae	76.97	2.00e-130	458.00
IUUC-Lpe-051470	Leersia perrieri	49.83	9.00e-88	316.00
IUUC-Loc-052452	Lepisosteus oculatus	74.92	2.00e-132	464.00
IUUC-Lma-053235	Leptosphaeria maculans	41.13	2.00e-27	115.00
IUUC-Laf-054315	Loxodonta africana	93.02	2.00e-166	578.00
IUUC-Mcc-054923	Macaca mulatta	93.33	3.00e-166	577.00
IUUC-Mor-056936	Magnaporthe oryzae	37.16	6.00e-45	174.00
IUUC-Mtr-058595	Medicago truncatula	51.01	5.00e-90	324.00
IUUC-Mla-058902	Melampsora laricipopulina	39.86	5.00e-62	230.00
IUUC-Mvi-060471	Microbotryum violaceum	44.30	4.00e-73	267.00
IUUC-Mmr-061665	Microcebus murinus	93.33	1.00e-177	615.00
IUUC-Mdo-062750	Monodelphis domestica	81.63	2.00e-134	471.00
IUUC-Mmu-063750	Mus musculus	90.79	9.00e-174	602.00
IUUC-Mac-065441	Musa acuminata	50.34	2.00e-89	322.00
IUUC-Mpu-066863	Mustela putorius furo	93.33	2.00e-177	614.00
IUUC-Mlu-067645	Myotis lucifugus	93.02	3.00e-176	610.00
IUUC-Nfi-068549	Neosartorya fischeri	36.69	6.00e-49	187.00
IUUC-Ncr-068816	Neurospora crassa	35.53	5.00e-42	164.00
IUUC-Nle-069457	Nomascus leucogenys	93.97	4.00e-167	580.00
IUUC-Opr-070874	Ochotona princeps	91.78	3.00e-77	281.00
IUUC-Ont-071674	Oreochromis niloticus	72.99	2.00e-121	428.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.42	3.00e-150	523.00
IUUC-Oba-075414	Oryza barthii	51.25	7.00e-85	306.00
IUUC-Obr-076739	Oryza brachyantha	48.81	3.00e-86	311.00
IUUC-Ogl-076962	Oryza glaberrima	49.83	8.00e-87	313.00
IUUC-Ogu-078831	Oryza glumaepatula	49.83	6.00e-87	313.00
IUUC-Oin-079985	Oryza indica	49.49	8.00e-87	313.00
IUUC-Ome-081333	Oryza meridionalis	49.45	1.00e-79	289.00
IUUC-Oni-082558	Oryza nivara	49.49	8.00e-87	313.00
IUUC-Opu-084091	Oryza punctata	50.17	1.00e-88	319.00
IUUC-Oru-085253	Oryza rufipogon	49.82	2.00e-81	295.00
IUUC-Osa-086077	Oryza sativa	49.49	8.00e-87	313.00
IUUC-Ola-086946	Oryzias latipes	71.38	2.00e-134	471.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.13	7.00e-53	200.00
IUUC-Oga-088681	Otolemur garnettii	91.64	3.00e-171	593.00
IUUC-Oar-089913	Ovis aries	92.70	3.00e-174	603.00
IUUC-Ptr-091343	Pan troglodytes	93.97	8.00e-166	575.00
IUUC-Pan-092078	Papio anubis	93.33	4.00e-166	577.00
IUUC-Psi-093190	Pelodiscus sinensis	80.25	1.00e-151	528.00
IUUC-Pno-095078	Phaeosphaeria nodorum	40.58	2.00e-55	209.00
IUUC-Ppa-095777	Physcomitrella patens	50.68	4.00e-90	324.00
IUUC-Pfo-097153	Poecilia formosa	74.26	2.00e-130	458.00
IUUC-Pab-098307	Pongo abelii	92.72	4.00e-164	570.00
IUUC-Pop-099315	Populus trichocarpa	52.72	1.00e-84	306.00
IUUC-Pca-100538	Procavia capensis	92.57	2.00e-147	514.00
IUUC-Ppe-101632	Prunus persica	49.66	5.00e-90	323.00
IUUC-Pva-102484	Pteropus vampyrus	95.87	0.00e+00	626.00
IUUC-Pgr-103495	Puccinia graminis	40.78	7.00e-65	240.00
IUUC-Ptt-103975	Puccinia triticina	40.43	3.00e-63	234.00
IUUC-Pte-104354	Pyrenophora teres	38.69	1.00e-43	169.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	39.05	5.00e-43	167.00
IUUC-Rno-105655	Rattus norvegicus	89.84	2.00e-172	597.00
IUUC-Sha-107130	Sarcophilus harrisii	82.20	2.00e-111	394.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.93	2.00e-58	218.00
IUUC-Spo-108131	Schizosaccharomyces pombe	39.78	2.00e-58	219.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	35.81	1.00e-45	176.00
IUUC-Smo-108996	Selaginella moellendorffii	47.80	2.00e-80	291.00
IUUC-Sit-110508	Setaria italica	50.51	2.00e-88	318.00
IUUC-Sly-111093	Solanum lycopersicum	48.99	6.00e-81	293.00
IUUC-Stu-112380	Solanum tuberosum	48.99	7.00e-81	293.00
IUUC-Sar-113127	Sorex araneus	86.11	5.00e-72	264.00
IUUC-Sbi-114461	Sorghum bicolor	49.49	7.00e-87	313.00
IUUC-Sre-115020	Sporisorium reilianum	41.38	1.00e-41	164.00
IUUC-Ssc-115632	Sus scrofa	92.60	1.00e-174	605.00
IUUC-Tru-118039	Takifugu rubripes	70.59	8.00e-128	449.00
IUUC-Tsy-119239	Tarsius syrichta	96.45	2.00e-94	338.00
IUUC-Tni-120097	Tetraodon nigroviridis	68.97	6.00e-126	443.00
IUUC-Tca-121695	Theobroma cacao	51.36	3.00e-92	331.00
IUUC-Tre-122182	Trichoderma reesei	36.52	3.00e-50	192.00
IUUC-Tvi-122429	Trichoderma virens	38.72	9.00e-54	203.00
IUUC-Tae-125136	Triticum aestivum	51.53	3.00e-90	324.00
IUUC-Tur-126216	Triticum urartu	51.52	2.00e-89	322.00
IUUC-Tme-127030	Tuber melanosporum	44.49	3.00e-63	234.00
IUUC-Tbe-127686	Tupaia belangeri	91.53	1.00e-100	359.00
IUUC-Ttr-128770	Tursiops truncatus	92.70	1.00e-175	608.00
IUUC-Uma-129446	Ustilago maydis	34.41	4.00e-36	146.00
IUUC-Vda-129680	Verticillium dahliae	38.93	2.00e-41	162.00
IUUC-Vvi-131292	Vitis vinifera	51.88	3.00e-91	327.00
IUUC-Xtr-132204	Xenopus tropicalis	74.84	3.00e-145	507.00
IUUC-Xma-133727	Xiphophorus maculatus	71.66	2.00e-128	451.00
IUUC-Zma-135908	Zea mays	49.49	2.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence