iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000315

Ensembl Protein ID

EMT20198

UniProt Accession

N1R1B5; N1R1B5_AEGTA

Genbank Protein ID

EMT20198.1

Protein Name

E3 ubiquitin-protein ligase

Genbank Nucleotide ID

KD527574

Gene Name

F775_26210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_26210	EMT20198	EMT20198

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-07	31.3	211	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC + ++dg  ++ lpCgH+fh  C+ kw         +++CPlC+
   Q: 211  CCICISAYDDGaeLRELPCGHHFHCACIDKW------LHINATCPLCK 252
           ******9988766889***************......**********7 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MPLRTWVAGY ALQCVVHMVC VAVEYRMRRS QRGGAPAPAD EERGSDGSSS SSDEDASEHH 60
LRGRDTDYVS LAKHLESANT MFSFIWWIIG FYWISAGGEE VIRDAPQLYW LCIVFLAFDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCTCC GGACCTGGGT CGCCGGCTAC GCCCTGCAGT GCGTCGTCCA CATGGTCTGC 60
GTCGCCGTCG AGTACCGGAT GCGCCGAAGC CAGCGCGGCG GGGCCCCGGC GCCCGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase
KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_26210

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002539	Amborella trichopoda	60.84	6.00e-81	293.00
IUUC-Aly-006096	Arabidopsis lyrata	60.99	2.00e-80	291.00
IUUC-Ath-007048	Arabidopsis thaliana	60.92	2.00e-81	295.00
IUUC-Bdi-014813	Brachypodium distachyon	83.52	1.00e-104	372.00
IUUC-Bol-015152	Brassica oleracea	61.71	9.00e-79	286.00
IUUC-Bra-018052	Brassica rapa	61.57	3.00e-80	291.00
IUUC-Gma-042691	Glycine max	62.55	5.00e-87	313.00
IUUC-Hvu-047468	Hordeum vulgare	97.00	8.00e-128	448.00
IUUC-Lpe-051302	Leersia perrieri	87.64	3.00e-114	403.00
IUUC-Mtr-058719	Medicago truncatula	63.27	2.00e-83	301.00
IUUC-Mac-064494	Musa acuminata	66.54	9.00e-87	313.00
IUUC-Oba-075346	Oryza barthii	84.64	4.00e-113	400.00
IUUC-Obr-076817	Oryza brachyantha	88.39	8.00e-110	389.00
IUUC-Ogl-077385	Oryza glaberrima	84.64	4.00e-113	400.00
IUUC-Ogu-078850	Oryza glumaepatula	84.64	6.00e-113	399.00
IUUC-Oin-079892	Oryza indica	88.76	9.00e-113	398.00
IUUC-Olo-080611	Oryza longistaminata	87.94	5.00e-116	412.00
IUUC-Ome-081780	Oryza meridionalis	88.72	4.00e-112	399.00
IUUC-Oni-082330	Oryza nivara	84.64	4.00e-113	400.00
IUUC-Opu-083495	Oryza punctata	83.90	4.00e-111	393.00
IUUC-Oru-084814	Oryza rufipogon	84.27	3.00e-112	397.00
IUUC-Osa-085284	Oryza sativa	84.27	3.00e-112	397.00
IUUC-Ppa-095516	Physcomitrella patens	55.38	4.00e-67	247.00
IUUC-Pop-099381	Populus trichocarpa	63.60	1.00e-79	289.00
IUUC-Ppe-101951	Prunus persica	63.20	8.00e-87	313.00
IUUC-Smo-109047	Selaginella moellendorffii	62.26	2.00e-74	272.00
IUUC-Sit-110742	Setaria italica	88.76	7.00e-113	399.00
IUUC-Sly-111350	Solanum lycopersicum	63.04	3.00e-80	291.00
IUUC-Stu-112503	Solanum tuberosum	63.04	6.00e-80	290.00
IUUC-Sbi-114146	Sorghum bicolor	86.94	1.00e-107	382.00
IUUC-Tca-121775	Theobroma cacao	63.81	8.00e-84	303.00
IUUC-Tae-124699	Triticum aestivum	99.25	2.00e-135	474.00
IUUC-Tur-126084	Triticum urartu	99.25	2.00e-130	459.00
IUUC-Vvi-131280	Vitis vinifera	65.19	1.00e-84	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence