iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2483__AT3G60220.1	fgenesh2_kg.5__2483__AT3G60220.1	fgenesh2_kg.5__2483__AT3G60220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.3	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  ++++++lp C H+fhadC+  w         +++CPlCr
   Q: 118  CAVCLSKFepEEQLRLLPlCCHAFHADCIDIW------LVSNQTCPLCR 160
           ******9988666*******************......999*******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDSLINPSHG GGNYDSHSSS LDSLKPSVLV IILILLMTLL ISVSICFLLR CLNRFSHRSV 60
IPPSSSSTSA ATVTSDSRRF SGHRVSPETE RSSVLDSLPI FKFSSVTRRS SSTNSGDCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAAAGCAA AGTGAAAAGC CAATTGATTT GATTTAACTT TTATGGAATT AAATATAGAC 60
AGTTTGAGTT GGTTCAATGA CATTTATTTC TCTGCCTCTT TCCCAACGTC CCCTTCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_486491

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007239	Arabidopsis thaliana	88.79	6.00e-108	383.00
IUUC-Bdi-014533	Brachypodium distachyon	34.55	2.00e-22	99.40
IUUC-Bol-015819	Brassica oleracea	74.58	5.00e-92	330.00
IUUC-Bra-017550	Brassica rapa	71.52	3.00e-89	321.00
IUUC-Gma-043797	Glycine max	44.32	7.00e-40	157.00
IUUC-Hvu-047273	Hordeum vulgare	31.75	1.00e-20	92.80
IUUC-Lpe-051366	Leersia perrieri	37.32	1.00e-20	93.60
IUUC-Mtr-058394	Medicago truncatula	49.03	3.00e-43	167.00
IUUC-Mac-065570	Musa acuminata	44.54	3.00e-19	88.60
IUUC-Oba-075944	Oryza barthii	32.24	6.00e-19	87.00
IUUC-Obr-076640	Oryza brachyantha	32.14	3.00e-17	82.00
IUUC-Ogl-077705	Oryza glaberrima	41.55	3.00e-19	88.60
IUUC-Ogu-078864	Oryza glumaepatula	36.18	2.00e-20	92.80
IUUC-Oin-079511	Oryza indica	40.85	1.00e-19	89.40
IUUC-Ome-081312	Oryza meridionalis	38.62	1.00e-18	87.00
IUUC-Oni-082796	Oryza nivara	41.55	3.00e-19	88.60
IUUC-Opu-083307	Oryza punctata	35.81	3.00e-21	95.50
IUUC-Oru-084702	Oryza rufipogon	41.55	3.00e-19	88.60
IUUC-Osa-085669	Oryza sativa	31.86	4.00e-20	91.70
IUUC-Pop-100094	Populus trichocarpa	53.10	2.00e-47	181.00
IUUC-Ppe-101209	Prunus persica	53.14	5.00e-51	194.00
IUUC-Sit-110129	Setaria italica	29.52	5.00e-18	84.70
IUUC-Sly-111858	Solanum lycopersicum	42.59	2.00e-39	155.00
IUUC-Stu-112105	Solanum tuberosum	43.56	2.00e-40	159.00
IUUC-Sbi-114578	Sorghum bicolor	38.03	4.00e-18	85.10
IUUC-Tca-120922	Theobroma cacao	58.71	4.00e-54	204.00
IUUC-Tae-124222	Triticum aestivum	40.88	2.00e-21	95.50
IUUC-Vvi-130862	Vitis vinifera	69.77	8.00e-30	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence