iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111202

Ensembl Protein ID

Solyc03g096870.2.1

UniProt Accession

K4BJA5; K4BJA5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g096870.2	Solyc03g096870.2.1	Solyc03g096870.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	6.00e-126	420.6	125	432
E3 adaptor/Cullin RING/DCX/DWD	8.70e-26	89.7	309	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrt 91
           e+ ldap++ dd+ylnLldW+s+nvl++aLg +vylw+a++g+ s+l  + ee+  vtsv+w ++g ++avG +++ev+++D ++++ +rt
   Q: 125  ERTLDAPDIMDDYYLNLLDWGSSNVLSIALGGTVYLWDASDGATSELVTVdEENGPVTSVKWAPDGRHIAVGLNNSEVQLWDSTANRLLRT 215
           689***********************************************888999*********************************** PP
   S: 92   l.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......Plkkf 175
           l  gh +rvgaL+Wn+++l++G+ dg+i  +dvr+++  ++t+q+h+qevCGlkw+ ++++LasGGnDn +++wd s+ +       l++ 
   Q: 216  LkGGHRSRVGALDWNNHILTTGGMDGQIINNDVRIRNPIVDTYQGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSTASsnsttqWLHRL 306
           *778***********************************************************************9877666677678899 PP
   S: 176  kehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgh 266
           ++h+aavka+aw+P+q +lLasGGG +Drcikfwnt tga+l++idtgsqvcsllw k+++el+s+hGf++n++tlwkyps+ kvael+gh
   Q: 307  EDHTAAVKALAWCPFQGNLLASGGGGSDRCIKFWNTHTGACLNSIDTGSQVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKVAELTGH 397
           9****************************************************************************************** PP
   S: 267  eaRvlslalspdgeaivtaagDetlrfwklfdkkk 301
           ++Rvl +a spdg ++++aagDetlrfw++f + +
   Q: 398  TSRVLFMAQSPDGCTVASAAGDETLRFWNVFGTPE 432
           *******************************8765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           Ht+ v +la+   +++ll+sG+   D  ik W+++tg +l
   Q: 309  HTAAVKALAWcpfQGNLLASGGggSDRCIKFWNTHTGACL 348
           9**********98669****5555*************997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDAGSHSASS NKKQSRCPLQ EQLLQRKNSR DNLDRFIPNR SAMDFDYAHY MLTEGRKGKE 60
NPAVSSPSRE AYRKQLAETF NMNRSRILAF KNKPPTPVEA IPNEIASVQQ NKTAKPRRYI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCTATCTA TCTCTTTCTC TCTCTAAGTT TCTCAAGCGA ACAAGCAAGC GATTTCGTCT 60
CGTGATTTAT ATTTTTTGTG TGCAATTATA ACTGTTTCAT TTGAATTTGT TTGTCTATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

sly:101250197

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	73.71	0.00e+00	696.00
IUUC-Atr-002628	Amborella trichopoda	70.20	2.00e-176	611.00
IUUC-Apl-003255	Anas platyrhynchos	46.14	3.00e-109	387.00
IUUC-Aly-006253	Arabidopsis lyrata	81.06	0.00e+00	771.00
IUUC-Ath-006795	Arabidopsis thaliana	81.32	0.00e+00	769.00
IUUC-Bta-012625	Bos taurus	44.65	2.00e-102	365.00
IUUC-Bdi-014344	Brachypodium distachyon	74.35	0.00e+00	697.00
IUUC-Bol-015851	Brassica oleracea	78.90	0.00e+00	755.00
IUUC-Bra-016738	Brassica rapa	78.90	0.00e+00	754.00
IUUC-Cja-019132	Callithrix jacchus	45.10	5.00e-104	370.00
IUUC-Cfa-020780	Canis familiaris	44.16	5.00e-103	367.00
IUUC-Cpo-022223	Cavia porcellus	44.65	3.00e-94	338.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	53.01	2.00e-121	428.00
IUUC-Csa-023666	Chlorocebus sabaeus	44.87	3.00e-103	368.00
IUUC-Cho-024920	Choloepus hoffmanni	63.96	3.00e-42	165.00
IUUC-Dno-028865	Dasypus novemcinctus	44.32	3.00e-100	357.00
IUUC-Dor-030958	Dipodomys ordii	44.42	2.00e-97	348.00
IUUC-Dme-031905	Drosophila melanogaster	46.38	3.00e-111	394.00
IUUC-Ete-032387	Echinops telfairi	41.04	2.00e-91	329.00
IUUC-Eeu-035059	Erinaceus europaeus	40.96	2.00e-84	305.00
IUUC-Gma-043985	Glycine max	83.76	0.00e+00	738.00
IUUC-Ggo-045052	Gorilla gorilla	44.65	5.00e-103	367.00
IUUC-Hsa-046305	Homo sapiens	44.65	5.00e-103	367.00
IUUC-Hvu-047565	Hordeum vulgare	76.76	0.00e+00	677.00
IUUC-Itr-048461	Ictidomys tridecemlineatus	44.87	4.00e-95	340.00
IUUC-Lpe-050954	Leersia perrieri	74.66	0.00e+00	645.00
IUUC-Laf-053742	Loxodonta africana	44.65	5.00e-102	363.00
IUUC-Mcc-054948	Macaca mulatta	44.87	3.00e-103	368.00
IUUC-Mtr-057725	Medicago truncatula	80.35	0.00e+00	742.00
IUUC-Mmr-061615	Microcebus murinus	44.16	3.00e-103	368.00
IUUC-Mmu-063864	Mus musculus	42.33	8.00e-98	350.00
IUUC-Mac-064861	Musa acuminata	77.57	0.00e+00	690.00
IUUC-Nle-070149	Nomascus leucogenys	44.65	2.00e-101	361.00
IUUC-Oan-073677	Ornithorhynchus anatinus	47.12	5.00e-98	350.00
IUUC-Ocu-073797	Oryctolagus cuniculus	44.16	1.00e-102	366.00
IUUC-Oba-075514	Oryza barthii	74.39	0.00e+00	653.00
IUUC-Obr-076018	Oryza brachyantha	74.03	0.00e+00	681.00
IUUC-Ogl-077254	Oryza glaberrima	74.61	0.00e+00	655.00
IUUC-Ogu-078562	Oryza glumaepatula	74.39	0.00e+00	653.00
IUUC-Oin-080094	Oryza indica	74.61	0.00e+00	655.00
IUUC-Olo-080449	Oryza longistaminata	74.24	0.00e+00	664.00
IUUC-Ome-081186	Oryza meridionalis	73.65	0.00e+00	683.00
IUUC-Oni-082243	Oryza nivara	74.61	0.00e+00	655.00
IUUC-Opu-084007	Oryza punctata	74.39	0.00e+00	649.00
IUUC-Oru-084357	Oryza rufipogon	74.39	0.00e+00	652.00
IUUC-Osa-086094	Oryza sativa	74.39	0.00e+00	653.00
IUUC-Olu-087647	Ostreococcus lucimarinus	59.18	4.00e-138	483.00
IUUC-Oga-088184	Otolemur garnettii	43.15	3.00e-99	354.00
IUUC-Ptr-090935	Pan troglodytes	44.42	1.00e-101	362.00
IUUC-Pan-091845	Papio anubis	44.87	3.00e-103	368.00
IUUC-Ppa-095687	Physcomitrella patens	67.72	1.00e-153	535.00
IUUC-Pab-098603	Pongo abelii	44.87	3.00e-103	368.00
IUUC-Pca-101062	Procavia capensis	44.04	2.00e-103	369.00
IUUC-Ppe-101865	Prunus persica	84.07	0.00e+00	756.00
IUUC-Pva-102925	Pteropus vampyrus	43.87	5.00e-104	370.00
IUUC-Rno-106005	Rattus norvegicus	42.33	3.00e-98	351.00
IUUC-Sha-107472	Sarcophilus harrisii	43.87	1.00e-101	362.00
IUUC-Spo-108075	Schizosaccharomyces pombe	43.61	7.00e-91	327.00
IUUC-Smo-108922	Selaginella moellendorffii	61.85	2.00e-154	538.00
IUUC-Sit-110470	Setaria italica	73.73	0.00e+00	673.00
IUUC-Stu-112024	Solanum tuberosum	98.68	0.00e+00	936.00
IUUC-Sar-113092	Sorex araneus	41.96	4.00e-94	337.00
IUUC-Sbi-114558	Sorghum bicolor	73.21	0.00e+00	668.00
IUUC-Ssc-115710	Sus scrofa	44.65	2.00e-102	365.00
IUUC-Tca-120949	Theobroma cacao	84.11	0.00e+00	806.00
IUUC-Tae-122784	Triticum aestivum	73.19	0.00e+00	700.00
IUUC-Tur-126193	Triticum urartu	75.16	0.00e+00	696.00
IUUC-Vvi-131245	Vitis vinifera	85.68	0.00e+00	739.00
IUUC-Xtr-131993	Xenopus tropicalis	49.28	4.00e-111	394.00
IUUC-Zma-135456	Zea mays	70.81	0.00e+00	669.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence