iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017594

Ensembl Protein ID

Bra029975.1-P

UniProt Accession

M4EMF5; M4EMF5_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra029975	Bra029975.1	Bra029975.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-28	100.1	58	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++p+ f+CpIsle+M+dPv+l++G+ty+rs+I+kw++ g+ tcP+t+q+l ++ ++Pn tl++li  w +++
   Q: 58   DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQK 129
           69******************************************************************9987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPMFQPLKRD GLVGGDGQVL DLDTAVKDGV LGGVNGGGGV VDEKVDLKAM IKELDLQDIP 60
SVFICPISLE PMQDPVTLCT GQTYERSNIH KWFSLGHLTC PTTMQELWDD AVTPNRTLHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATGT TTCAGCCGTT GAAGAGAGAC GGGCTAGTCG GTGGCGATGG GCAAGTGTTA 60
GATCTGGACA CGGCGGTGAA AGACGGAGTT CTTGGGGGAG TAAACGGCGG AGGAGGAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0071472--P:cellular response to salt stress
GO:1901001--P:negative regulation of response to salt stress

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	57.63	1.00e-143	502.00
IUUC-Atr-002608	Amborella trichopoda	65.70	2.00e-149	521.00
IUUC-Aly-005542	Arabidopsis lyrata	90.83	0.00e+00	738.00
IUUC-Ath-007399	Arabidopsis thaliana	92.19	0.00e+00	743.00
IUUC-Bdi-014966	Brachypodium distachyon	58.28	1.00e-147	516.00
IUUC-Bol-015410	Brassica oleracea	96.20	0.00e+00	767.00
IUUC-Gma-043270	Glycine max	71.71	0.00e+00	632.00
IUUC-Hvu-047172	Hordeum vulgare	57.73	8.00e-140	489.00
IUUC-Lpe-050937	Leersia perrieri	57.39	3.00e-127	447.00
IUUC-Mtr-058060	Medicago truncatula	72.28	0.00e+00	626.00
IUUC-Mac-065223	Musa acuminata	65.20	3.00e-146	511.00
IUUC-Oba-075363	Oryza barthii	53.12	4.00e-101	360.00
IUUC-Obr-076221	Oryza brachyantha	57.85	1.00e-135	476.00
IUUC-Ogl-077601	Oryza glaberrima	58.06	2.00e-122	431.00
IUUC-Ogu-078802	Oryza glumaepatula	57.85	6.00e-131	460.00
IUUC-Oin-079670	Oryza indica	57.85	5.00e-122	431.00
IUUC-Olo-080252	Oryza longistaminata	63.74	9.00e-81	293.00
IUUC-Ome-081565	Oryza meridionalis	57.85	5.00e-122	431.00
IUUC-Oni-082638	Oryza nivara	57.85	5.00e-122	431.00
IUUC-Opu-083387	Oryza punctata	57.85	2.00e-122	432.00
IUUC-Oru-084585	Oryza rufipogon	57.85	5.00e-122	431.00
IUUC-Osa-086056	Oryza sativa	57.85	5.00e-122	431.00
IUUC-Pop-098956	Populus trichocarpa	67.34	9.00e-156	542.00
IUUC-Ppe-101617	Prunus persica	72.61	1.00e-176	612.00
IUUC-Sit-109761	Setaria italica	58.71	2.00e-136	478.00
IUUC-Sly-111041	Solanum lycopersicum	59.24	3.00e-137	481.00
IUUC-Stu-112727	Solanum tuberosum	64.14	4.00e-164	570.00
IUUC-Sbi-113971	Sorghum bicolor	58.49	3.00e-143	501.00
IUUC-Tca-121202	Theobroma cacao	75.61	0.00e+00	671.00
IUUC-Tae-123424	Triticum aestivum	57.42	6.00e-143	500.00
IUUC-Tur-126157	Triticum urartu	63.04	1.00e-60	226.00
IUUC-Vvi-131367	Vitis vinifera	76.56	0.00e+00	636.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence