iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081778

Ensembl Protein ID

OMERI03G10250.1

UniProt Accession

A0A0E0CY72; A0A0E0CY72_9ORYZ

Protein Name

Chorismate synthase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI03G10250	OMERI03G10250.1	OMERI03G10250.1
OMERI03G10250	OMERI03G10250.2	OMERI03G10250.2
OMERI03G10250	OMERI03G10250.3	OMERI03G10250.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-19	70.0	992	1027
UBD/Beta-Prp	1.10e-46	160.3	946	1213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++  l +++++dD+tikvW+ ++g
   Q: 992  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSG 1027
           99*********97653359************98876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghe 94
           +++  ++ + +spd++l+ +++ ++ +++++++ g+ +r+      h ++v+++ f +  k   ++t+++D+tikvw+  +g    t++ghe
   Q: 946  DPTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQHleiDAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGAKQFTFEGHE 1037
           55566777899************************99665323389**********99888899**************************** PP
   S: 95   dsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgght 180
           + v+s+  +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  +
   Q: 1038 APVYSVCPHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRK 1128
           *****855544388***************99998777756555.5699999999*9*999998334566544333999************** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
           +s   ++fd ++++++++++   +k+wd+ +++ + t  +    + s  vrf +++++l++ ++++ i+i  + +   ll+tl++
   Q: 1129 RSMGVVQFDTTRNRFLAAGDEFLIKIWDMDNTSLLTTIDADGGLPASprVRFNKEGTLLAVSTHENGIKILaNADGVRLLRTLEN 1213
           **************************************9999877753377889999999999******9656666566666555 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MARSDYKSKS HNVCPPVARV LPRGGGGFRA FPESAPASLR FSVGRRRAAR LEVKASANVF 60
GNYFQVATYG ESHGGGVGCV ISGCPPRIPL TEADMQVELD RRRPGQSRIT TPRKETDTCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGGT CAGATTACAA GTCAAAATCT CACAACGTCT GTCCGGTTCA AACACCGGAT 60
CAGTGAATCG GCCGAGCGGT TCAAGCTAGT TCGGCTGGTG AACCGGGCGG TTTTTTATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0028--Amino-acid biosynthesis
KW-0057--Aromatic amino acid biosynthesis
KW-0181--Complete proteome
KW-0456--Lyase
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000453--Chorismate_synth
IPR020541--Chorismate_synthase_CS
IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00787--CHORISMATE_SYNTHASE_1
PS00788--CHORISMATE_SYNTHASE_2
PS00789--CHORISMATE_SYNTHASE_3
PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01264--Chorismate_synt
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0004107--F:chorismate synthase activity
GO:0009073--P:aromatic amino acid family biosynthetic process
GO:0009423--P:chorismate biosynthetic process
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	92.72	0.00e+00	2112.00
IUUC-Atr-002737	Amborella trichopoda	78.11	0.00e+00	1747.00
IUUC-Aly-005472	Arabidopsis lyrata	78.06	0.00e+00	1740.00
IUUC-Ath-007640	Arabidopsis thaliana	77.08	0.00e+00	1748.00
IUUC-Bdi-014914	Brachypodium distachyon	92.33	0.00e+00	2071.00
IUUC-Bol-015359	Brassica oleracea	77.41	0.00e+00	1738.00
IUUC-Bra-016893	Brassica rapa	77.14	0.00e+00	1735.00
IUUC-Gma-043911	Glycine max	81.40	0.00e+00	1831.00
IUUC-Hvu-047688	Hordeum vulgare	93.28	0.00e+00	1988.00
IUUC-Lpe-051514	Leersia perrieri	95.21	0.00e+00	2077.00
IUUC-Mtr-058037	Medicago truncatula	81.09	0.00e+00	1794.00
IUUC-Mac-065382	Musa acuminata	83.32	0.00e+00	1912.00
IUUC-Oba-075912	Oryza barthii	99.91	0.00e+00	2184.00
IUUC-Obr-076921	Oryza brachyantha	97.44	0.00e+00	2176.00
IUUC-Ogl-077334	Oryza glaberrima	99.91	0.00e+00	2214.00
IUUC-Ogu-078494	Oryza glumaepatula	99.91	0.00e+00	2214.00
IUUC-Oin-079720	Oryza indica	98.35	0.00e+00	2203.00
IUUC-Olo-081034	Oryza longistaminata	94.55	0.00e+00	2157.00
IUUC-Oni-082412	Oryza nivara	99.91	0.00e+00	2184.00
IUUC-Opu-083406	Oryza punctata	96.63	0.00e+00	2116.00
IUUC-Oru-084328	Oryza rufipogon	99.82	0.00e+00	2204.00
IUUC-Osa-085765	Oryza sativa	99.91	0.00e+00	2214.00
IUUC-Pop-098876	Populus trichocarpa	78.82	0.00e+00	1794.00
IUUC-Ppe-101370	Prunus persica	81.98	0.00e+00	1885.00
IUUC-Sit-110288	Setaria italica	92.51	0.00e+00	2065.00
IUUC-Sly-111739	Solanum lycopersicum	79.86	0.00e+00	1813.00
IUUC-Stu-112409	Solanum tuberosum	70.13	0.00e+00	1590.00
IUUC-Sbi-114078	Sorghum bicolor	92.33	0.00e+00	2060.00
IUUC-Tca-121628	Theobroma cacao	79.37	0.00e+00	1810.00
IUUC-Tae-125398	Triticum aestivum	93.57	0.00e+00	2126.00
IUUC-Tur-126412	Triticum urartu	91.19	0.00e+00	2098.00
IUUC-Vvi-131079	Vitis vinifera	80.42	0.00e+00	1813.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence