iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121289

Ensembl Protein ID

EOY18055

UniProt Accession

A0A061FLU6; A0A061FLU6_THECC

Genbank Protein ID

EOY18054.1; EOY18055.1; EOY18056.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001888; CM001888; CM001888

Gene Name

TCM_042713

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042713	EOY18055	EOY18055

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-08	34.9	212	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle     d  ++lpC H+fha+C+  w       +++ +CP+C+
   Q: 212  CSICLEQVsvGDLIRSLPCLHQFHASCIDPW------LRQQGTCPVCK 253
           ******8855554999***************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSFVFRGTRS DLESGLPGFI PERRAVRVHA GRPVNSNSLV FLVTVLLLFM ILNSHQMSPN 60
FLLWLVLGVF LMATTLRMYA TCQQLQAQAQ AHAAAASGLL GHTELRLHMP PSIALATRGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCGTTTTG GAGTCTTCGT TATGGTTTAG AGACCAGAAG GCAAAAAAGG CTTCTTTCAA 60
GCTGACGAGG AAAGCGTTAG GCAGGAAACG CCCGACGCGT CCGAGTCGAC TCGGTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015038	Brachypodium distachyon	67.25	6.00e-75	273.00
IUUC-Fox-038011	Fusarium oxysporum	35.56	2.00e-16	79.30
IUUC-Fso-038141	Fusarium solani	50.72	7.00e-15	74.70
IUUC-Gma-044260	Glycine max	84.70	9.00e-107	378.00
IUUC-Hvu-047764	Hordeum vulgare	67.38	4.00e-68	250.00
IUUC-Lpe-051371	Leersia perrieri	69.86	2.00e-79	288.00
IUUC-Mor-056917	Magnaporthe oryzae	37.50	5.00e-13	68.60
IUUC-Mtr-058078	Medicago truncatula	83.52	6.00e-107	379.00
IUUC-Oan-073037	Ornithorhynchus anatinus	54.55	1.00e-11	64.30
IUUC-Oba-075903	Oryza barthii	61.50	1.00e-32	131.00
IUUC-Obr-076184	Oryza brachyantha	62.03	5.00e-69	253.00
IUUC-Ogl-076965	Oryza glaberrima	70.32	2.00e-79	287.00
IUUC-Ogu-078414	Oryza glumaepatula	62.41	4.00e-65	239.00
IUUC-Oin-079430	Oryza indica	70.32	4.00e-79	286.00
IUUC-Olo-080739	Oryza longistaminata	69.96	7.00e-79	286.00
IUUC-Ome-081538	Oryza meridionalis	69.61	2.00e-79	288.00
IUUC-Oni-082633	Oryza nivara	69.61	3.00e-79	287.00
IUUC-Opu-084125	Oryza punctata	69.96	6.00e-78	283.00
IUUC-Oru-085061	Oryza rufipogon	62.41	4.00e-65	239.00
IUUC-Osa-086209	Oryza sativa	70.32	4.00e-79	286.00
IUUC-Pop-099911	Populus trichocarpa	81.16	7.00e-97	345.00
IUUC-Ppe-101792	Prunus persica	83.33	9.00e-103	365.00
IUUC-Sit-110587	Setaria italica	78.12	4.00e-16	75.50
IUUC-Sbi-113958	Sorghum bicolor	68.77	4.00e-81	293.00
IUUC-Tae-125370	Triticum aestivum	66.07	3.00e-67	247.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence