iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028051

Ensembl Protein ID

ENSDARP00000124457.1

UniProt Accession

A9JR96; A9JR96_DANRE

Genbank Protein ID

AAI55573.1; AAI62316.1; AAI62617.1

Protein Name

WD repeat domain 43

Genbank Nucleotide ID

CR388164; BC162316; BC162617

Gene Name

wdr43; wdr43l

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000077264.4	ENSDART00000112389.2	ENSDARP00000124457.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-16	61.3	115	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v+++++ ++   l sGsdD  i  WDl+tg++ 
   Q: 115  GHSGPVNSVQWhPEdSVLYSGSDDTHIAEWDLKTGKVC 152
           8***********77689*****************9875 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAADGGRAAL PCAFSPKSHQ FLALCAQDGR LRIWNTESKT LQQEYVPSAH LSAACTCVTW 60
GPCRAVQEVP QRKRRKCDAA SSAEQSDLLA LGTAAGTILI YSTLKGDLHC TLDGGHSGPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGTAAGATG GCGGCGGACG GAGGCCGAGC TGCGTTACCC TGCGCCTTCA GCCCTAAATC 60
ACATCAGTTT TTGGCTCTCT GCGCGCAAGA TGGGAGACTG CGAATCTGGA ATACCGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001525--P:angiogenesis
GO:0048703--P:embryonic viscerocranium morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0042254--P:ribosome biogenesis
GO:0001570--P:vasculogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	54.15	0.00e+00	636.00
IUUC-Atr-002533	Amborella trichopoda	26.94	2.00e-26	114.00
IUUC-Apl-003242	Anas platyrhynchos	58.11	1.00e-178	619.00
IUUC-Aca-004607	Anolis carolinensis	55.87	0.00e+00	662.00
IUUC-Aly-006074	Arabidopsis lyrata	29.62	8.00e-20	92.00
IUUC-Ath-007222	Arabidopsis thaliana	29.69	3.00e-20	94.00
IUUC-Ame-011014	Astyanax mexicanus	74.16	0.00e+00	889.00
IUUC-Bta-012605	Bos taurus	54.55	0.00e+00	639.00
IUUC-Bdi-014072	Brachypodium distachyon	26.58	5.00e-24	106.00
IUUC-Bol-016255	Brassica oleracea	30.86	9.00e-27	115.00
IUUC-Bra-017484	Brassica rapa	32.52	9.00e-28	118.00
IUUC-Cja-019620	Callithrix jacchus	54.71	0.00e+00	650.00
IUUC-Cfa-020520	Canis familiaris	53.88	0.00e+00	640.00
IUUC-Cpo-022456	Cavia porcellus	53.12	0.00e+00	634.00
IUUC-Cho-024726	Choloepus hoffmanni	54.67	3.00e-177	615.00
IUUC-Cin-025761	Ciona intestinalis	35.08	3.00e-87	316.00
IUUC-Dno-030031	Dasypus novemcinctus	54.23	0.00e+00	642.00
IUUC-Dme-031653	Drosophila melanogaster	27.21	1.00e-47	184.00
IUUC-Ete-032863	Echinops telfairi	67.13	1.00e-54	207.00
IUUC-Eca-033243	Equus caballus	54.25	6.00e-158	550.00
IUUC-Eeu-034970	Erinaceus europaeus	50.39	6.00e-131	461.00
IUUC-Fca-036009	Felis catus	54.99	0.00e+00	636.00
IUUC-Fal-037264	Ficedula albicollis	56.65	2.00e-172	599.00
IUUC-Gmo-039124	Gadus morhua	71.16	0.00e+00	846.00
IUUC-Gga-040862	Gallus gallus	57.92	0.00e+00	672.00
IUUC-Gac-041468	Gasterosteus aculeatus	68.27	0.00e+00	833.00
IUUC-Gma-042795	Glycine max	26.69	1.00e-17	85.10
IUUC-Ggo-044432	Gorilla gorilla	51.61	0.00e+00	655.00
IUUC-Hsa-047036	Homo sapiens	51.83	0.00e+00	654.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	53.64	0.00e+00	629.00
IUUC-Lch-049553	Latimeria chalumnae	53.46	0.00e+00	642.00
IUUC-Laf-053462	Loxodonta africana	54.88	0.00e+00	645.00
IUUC-Mcc-055239	Macaca mulatta	54.38	0.00e+00	647.00
IUUC-Mtr-057977	Medicago truncatula	25.45	2.00e-22	101.00
IUUC-Mga-060079	Meleagris gallopavo	58.03	7.00e-175	607.00
IUUC-Mmr-061472	Microcebus murinus	54.71	0.00e+00	645.00
IUUC-Mdo-061972	Monodelphis domestica	53.90	0.00e+00	654.00
IUUC-Mmu-063354	Mus musculus	54.73	0.00e+00	644.00
IUUC-Mac-065064	Musa acuminata	27.80	2.00e-22	100.00
IUUC-Mpu-066877	Mustela putorius furo	54.47	0.00e+00	640.00
IUUC-Mlu-067476	Myotis lucifugus	52.98	2.00e-178	619.00
IUUC-Nle-069119	Nomascus leucogenys	54.38	0.00e+00	648.00
IUUC-Ont-072093	Oreochromis niloticus	71.03	0.00e+00	910.00
IUUC-Oan-072944	Ornithorhynchus anatinus	54.37	1.00e-178	619.00
IUUC-Ocu-074472	Oryctolagus cuniculus	54.23	4.00e-179	621.00
IUUC-Oba-075009	Oryza barthii	25.75	1.00e-20	95.50
IUUC-Ogl-077189	Oryza glaberrima	25.27	2.00e-20	94.70
IUUC-Oin-079064	Oryza indica	25.82	4.00e-21	96.30
IUUC-Opu-083604	Oryza punctata	24.93	8.00e-22	99.00
IUUC-Oru-084620	Oryza rufipogon	25.75	2.00e-20	94.40
IUUC-Osa-085345	Oryza sativa	25.75	1.00e-20	95.10
IUUC-Ola-086626	Oryzias latipes	67.66	0.00e+00	840.00
IUUC-Oga-087911	Otolemur garnettii	54.33	0.00e+00	631.00
IUUC-Ptr-091603	Pan troglodytes	51.98	0.00e+00	656.00
IUUC-Pan-092569	Papio anubis	54.38	0.00e+00	647.00
IUUC-Pma-094287	Petromyzon marinus	48.01	3.00e-163	568.00
IUUC-Ppa-095327	Physcomitrella patens	27.09	2.00e-29	124.00
IUUC-Pfo-097292	Poecilia formosa	72.18	0.00e+00	840.00
IUUC-Pab-097878	Pongo abelii	54.82	0.00e+00	643.00
IUUC-Pop-099418	Populus trichocarpa	23.59	1.00e-22	101.00
IUUC-Pca-100941	Procavia capensis	52.63	1.00e-166	580.00
IUUC-Ppe-101779	Prunus persica	22.20	1.00e-23	104.00
IUUC-Pva-102493	Pteropus vampyrus	50.76	1.00e-163	570.00
IUUC-Rno-105084	Rattus norvegicus	54.64	5.00e-180	624.00
IUUC-Sha-107486	Sarcophilus harrisii	54.89	0.00e+00	652.00
IUUC-Smo-108825	Selaginella moellendorffii	28.45	2.00e-19	91.30
IUUC-Sit-110825	Setaria italica	22.28	4.00e-21	96.70
IUUC-Sly-111365	Solanum lycopersicum	27.69	3.00e-22	100.00
IUUC-Stu-112812	Solanum tuberosum	24.14	3.00e-21	97.10
IUUC-Sar-113326	Sorex araneus	59.57	4.00e-83	302.00
IUUC-Sbi-114426	Sorghum bicolor	25.76	1.00e-24	108.00
IUUC-Tgu-116726	Taeniopygia guttata	56.37	0.00e+00	663.00
IUUC-Tru-117848	Takifugu rubripes	70.82	0.00e+00	847.00
IUUC-Tsy-119091	Tarsius syrichta	42.42	5.00e-79	288.00
IUUC-Tni-120591	Tetraodon nigroviridis	66.67	0.00e+00	834.00
IUUC-Tca-121576	Theobroma cacao	27.91	3.00e-21	97.10
IUUC-Tae-125648	Triticum aestivum	23.34	4.00e-24	106.00
IUUC-Tbe-127832	Tupaia belangeri	54.63	1.00e-161	563.00
IUUC-Ttr-128812	Tursiops truncatus	55.09	2.00e-160	559.00
IUUC-Xma-133557	Xiphophorus maculatus	72.18	0.00e+00	839.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence