iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016371

Ensembl Protein ID

Bo00834s040.1

UniProt Accession

A0A0D2ZRF4; A0A0D2ZRF4_BRAOL

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo00834s040	Bo00834s040.1	Bo00834s040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.50e-16	59.8	116	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskks 75
           vkvs++g+++++++dl+ + +++dL +a+ + +                         l++s++ ++YeD+dGD++ l++D+++ ++v+      s
   Q: 116  VKVSMDGAPYLRKIDLKLYKTYQDLSDALSKmFSsftigncgpqgmkdfmnesrlidLLNGSDYVPTYEDKDGDWM-LVGDVPWGMFVD------S 204
           9******************************6225669999***************99999***************.************......* PP
   S: 76   llrlliqk 83
           ++r++i+k
   Q: 205  CKRIRIMK 212
           *******8 PP

Organism

Brassica oleracea

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MINFEATELR LGLPGGNHGG DMAMKNNGKR GFSETVDLKL NLSSTAMDSV SVVDLENMKE 60
KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TAGDAAEGTE KTSSSNAATS SAAAYVKVSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCAATT TTGAGGCGAC GGAGCTGAGG TTAGGGCTGC CGGGTGGCAA TCACGGAGGA 60
GACATGGCCA TGAAAAATAA TGGGAAACGA GGATTTTCTG AGACCGTTGA TCTCAAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	59.26	2.00e-49	187.00
IUUC-Atr-002559	Amborella trichopoda	61.89	4.00e-79	287.00
IUUC-Aly-006188	Arabidopsis lyrata	88.14	1.00e-100	358.00
IUUC-Ath-007356	Arabidopsis thaliana	90.68	7.00e-108	382.00
IUUC-Bdi-014859	Brachypodium distachyon	57.30	1.00e-71	262.00
IUUC-Bra-016936	Brassica rapa	97.40	1.00e-113	401.00
IUUC-Gma-043010	Glycine max	62.40	5.00e-80	290.00
IUUC-Hvu-047087	Hordeum vulgare	69.82	1.00e-65	241.00
IUUC-Mtr-058641	Medicago truncatula	65.71	1.00e-80	292.00
IUUC-Mac-065450	Musa acuminata	60.62	8.00e-68	249.00
IUUC-Obr-076745	Oryza brachyantha	54.96	6.00e-65	239.00
IUUC-Ogl-077429	Oryza glaberrima	49.81	7.00e-60	223.00
IUUC-Ogu-078911	Oryza glumaepatula	54.09	4.00e-66	244.00
IUUC-Olo-080519	Oryza longistaminata	50.63	4.00e-40	157.00
IUUC-Opu-083338	Oryza punctata	52.09	4.00e-46	177.00
IUUC-Oru-084731	Oryza rufipogon	52.78	1.00e-45	175.00
IUUC-Pop-099218	Populus trichocarpa	71.90	1.00e-84	305.00
IUUC-Ppe-101622	Prunus persica	60.23	3.00e-75	274.00
IUUC-Sit-110063	Setaria italica	59.16	1.00e-70	259.00
IUUC-Sly-111769	Solanum lycopersicum	71.37	5.00e-90	323.00
IUUC-Stu-112038	Solanum tuberosum	70.45	2.00e-87	314.00
IUUC-Sbi-114725	Sorghum bicolor	73.96	6.00e-66	243.00
IUUC-Tca-121532	Theobroma cacao	72.69	6.00e-92	329.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence