iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131428

UUCD1 version

UUC-ViV-00217

Ensembl Protein ID

VIT_07s0151g00790.t01

UniProt Accession

D7TDY8; D7TDY8_VITVI

Genbank Protein ID

CBI28711.3

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Genbank Nucleotide ID

FN595764

Gene Name

TRM82; VIT_07s0151g00790

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0151g00790	VIT_07s0151g00790.t01	VIT_07s0151g00790.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.30e-18	64.4	200	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v+claf      ++++lvsGs+D t+++WD+++g ll 
   Q: 200  GHTEFVSCLAFvcapdyPEGFLVSGSGDSTVRLWDITSGSLLD 242
           8*************6666699*****************99875 PP

Organism

Vitis vinifera

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEEPAIEEGD NHRDVEVAPA LISVHPDHKF IVVSIGSDLR VFDLQGGCSV TLVDDSSGPL 60
HKDSIRAIRF GAEGKLFVSA GDDKLVKIWN ANSWHCISTV CSEKRVSAVA ISKDGLFVCF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTTCTCTC TCACATTGCA AAAATGGAGG AACCTGCAAT CGAGGAAGGA GACAACCACC 60
GAGATGTTGA GGTGGCTCCA GCCTTAATCT CAGTTCATCC GGACCATAAA TTCATCGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043527--C:tRNA methyltransferase complex
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

vvi:100855304

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	51.20	9.00e-102	362.00
IUUC-Atr-002431	Amborella trichopoda	59.20	7.00e-41	158.00
IUUC-Apl-003975	Anas platyrhynchos	31.17	1.00e-21	97.10
IUUC-Aca-005170	Anolis carolinensis	33.15	2.00e-15	76.30
IUUC-Aly-005769	Arabidopsis lyrata	62.73	4.00e-150	523.00
IUUC-Ath-006733	Arabidopsis thaliana	61.76	2.00e-145	507.00
IUUC-Acl-008151	Aspergillus clavatus	24.91	2.00e-13	69.70
IUUC-Afl-008518	Aspergillus flavus	27.64	4.00e-14	71.20
IUUC-Aor-010133	Aspergillus oryzae	26.03	4.00e-15	75.50
IUUC-Ame-010613	Astyanax mexicanus	34.22	5.00e-22	97.80
IUUC-Bgr-012067	Blumeria graminis	34.26	2.00e-13	69.70
IUUC-Bta-012788	Bos taurus	36.02	4.00e-23	101.00
IUUC-Bdi-014458	Brachypodium distachyon	55.50	1.00e-113	402.00
IUUC-Bol-016398	Brassica oleracea	61.48	3.00e-139	487.00
IUUC-Bra-016644	Brassica rapa	60.60	8.00e-139	487.00
IUUC-Cpo-021963	Cavia porcellus	34.87	4.00e-22	98.20
IUUC-Csa-024148	Chlorocebus sabaeus	35.75	1.00e-14	73.60
IUUC-Cne-026834	Cryptococcus neoformans	28.02	9.00e-16	77.40
IUUC-Dre-028427	Danio rerio	35.39	5.00e-24	104.00
IUUC-Dor-030522	Dipodomys ordii	35.05	5.00e-21	94.40
IUUC-Dme-032136	Drosophila melanogaster	37.27	2.00e-12	66.20
IUUC-Fca-035833	Felis catus	34.41	3.00e-21	95.10
IUUC-Fal-037497	Ficedula albicollis	30.52	8.00e-21	93.60
IUUC-Gga-040547	Gallus gallus	36.36	1.00e-19	90.10
IUUC-Gac-041761	Gasterosteus aculeatus	31.37	3.00e-21	95.10
IUUC-Gma-043722	Glycine max	65.34	8.00e-154	535.00
IUUC-Ggo-045340	Gorilla gorilla	35.75	1.00e-14	73.60
IUUC-Hsa-046403	Homo sapiens	35.75	6.00e-15	74.30
IUUC-Hvu-047643	Hordeum vulgare	54.78	9.00e-118	416.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	34.87	1.00e-22	100.00
IUUC-Kpa-049283	Komagataella pastoris	34.07	2.00e-17	82.80
IUUC-Lch-050682	Latimeria chalumnae	32.92	1.00e-26	113.00
IUUC-Lpe-050712	Leersia perrieri	51.83	8.00e-119	419.00
IUUC-Loc-052599	Lepisosteus oculatus	31.75	3.00e-26	112.00
IUUC-Laf-054390	Loxodonta africana	36.98	2.00e-24	106.00
IUUC-Mcc-054747	Macaca mulatta	35.23	1.00e-14	73.20
IUUC-Mtr-058600	Medicago truncatula	64.06	4.00e-154	536.00
IUUC-Mla-059135	Melampsora laricipopulina	29.37	8.00e-22	97.40
IUUC-Mga-059876	Meleagris gallopavo	31.17	8.00e-21	93.60
IUUC-Mvi-060359	Microbotryum violaceum	23.95	2.00e-14	73.60
IUUC-Mmr-061518	Microcebus murinus	35.08	1.00e-19	89.70
IUUC-Mac-065625	Musa acuminata	59.33	4.00e-133	466.00
IUUC-Nle-069914	Nomascus leucogenys	34.20	1.00e-11	63.50
IUUC-Ont-071555	Oreochromis niloticus	32.19	8.00e-23	100.00
IUUC-Oan-072951	Ornithorhynchus anatinus	34.22	9.00e-22	97.10
IUUC-Ocu-074679	Oryctolagus cuniculus	36.76	2.00e-15	75.90
IUUC-Oba-075355	Oryza barthii	48.69	2.00e-108	385.00
IUUC-Obr-076769	Oryza brachyantha	52.52	2.00e-128	451.00
IUUC-Ogl-077168	Oryza glaberrima	53.22	9.00e-125	439.00
IUUC-Ogu-078275	Oryza glumaepatula	48.46	3.00e-107	381.00
IUUC-Oin-079207	Oryza indica	53.22	9.00e-125	439.00
IUUC-Ome-081169	Oryza meridionalis	46.41	9.00e-46	177.00
IUUC-Oni-082437	Oryza nivara	48.93	6.00e-108	383.00
IUUC-Opu-084031	Oryza punctata	53.22	3.00e-122	431.00
IUUC-Oru-084380	Oryza rufipogon	48.69	4.00e-108	384.00
IUUC-Osa-085327	Oryza sativa	53.22	2.00e-124	437.00
IUUC-Ola-086716	Oryzias latipes	34.48	2.00e-23	102.00
IUUC-Olu-087708	Ostreococcus lucimarinus	36.23	1.00e-38	153.00
IUUC-Oar-090239	Ovis aries	36.02	4.00e-23	101.00
IUUC-Ptr-090851	Pan troglodytes	35.75	1.00e-14	73.20
IUUC-Pan-092558	Papio anubis	35.75	9.00e-15	73.60
IUUC-Psi-093792	Pelodiscus sinensis	32.62	9.00e-20	90.50
IUUC-Ppa-095757	Physcomitrella patens	41.69	2.00e-81	295.00
IUUC-Pfo-096465	Poecilia formosa	31.80	5.00e-23	101.00
IUUC-Pab-097722	Pongo abelii	35.23	4.00e-15	74.70
IUUC-Pop-098979	Populus trichocarpa	67.73	4.00e-167	580.00
IUUC-Pca-100753	Procavia capensis	48.96	2.00e-16	79.00
IUUC-Ppe-101515	Prunus persica	70.44	1.00e-173	601.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	24.93	3.00e-16	79.00
IUUC-Smo-108938	Selaginella moellendorffii	42.79	1.00e-74	272.00
IUUC-Sit-110020	Setaria italica	52.52	4.00e-117	414.00
IUUC-Sly-111543	Solanum lycopersicum	65.13	8.00e-164	568.00
IUUC-Stu-111925	Solanum tuberosum	65.13	1.00e-165	575.00
IUUC-Sbi-114061	Sorghum bicolor	52.29	2.00e-122	431.00
IUUC-Tgu-117321	Taeniopygia guttata	30.92	2.00e-18	85.50
IUUC-Tru-118454	Takifugu rubripes	33.05	9.00e-23	100.00
IUUC-Tni-119894	Tetraodon nigroviridis	33.05	2.00e-18	85.50
IUUC-Tca-121746	Theobroma cacao	67.11	2.00e-169	587.00
IUUC-Tae-124459	Triticum aestivum	55.50	2.00e-120	424.00
IUUC-Tur-126254	Triticum urartu	51.92	3.00e-98	350.00
IUUC-Tbe-127683	Tupaia belangeri	49.47	9.00e-16	77.00
IUUC-Ttr-129056	Tursiops truncatus	35.48	9.00e-23	100.00
IUUC-Xma-133605	Xiphophorus maculatus	32.50	6.00e-23	100.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence