iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110920

Ensembl Protein ID

Solyc11g007780.1.1

UniProt Accession

K4D539; K4D539_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g007780.1	Solyc11g007780.1.1	Solyc11g007780.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-06	28.0	157	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           ++++f  d  +l+s s Dg  ++W++r+gv+
   Q: 157  RDMDFsLDsEFLASTSTDGAARIWNTRDGVP 187
           6677885559*******************97 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEGGDVSVEG KVTRASWIKR PENAHLVVIG KSTGTCSSLE ILSFNSESTS LSSSPKATYV 60
LEEGGEPVRI AVHPTGDDFV CSTTTGCKLF ELYGHEDNIK FVCKEFPLQD VGPQKCMAFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGTG GTGATGTATC TGTTGAAGGG AAAGTGACGC GTGCATCGTG GATCAAACGG 60
CCGGAAAACG CGCATCTGGT GGTGATCGGA AAGTCGACCG GAACCTGTTC TTCGTTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005886--C:plasma membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0016036--P:cellular response to phosphate starvation
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006817--P:phosphate ion transport
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

sly:101258215

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	56.02	3.00e-101	360.00
IUUC-Atr-002477	Amborella trichopoda	58.93	2.00e-121	427.00
IUUC-Bdi-014908	Brachypodium distachyon	53.87	2.00e-102	364.00
IUUC-Cel-018480	Caenorhabditis elegans	25.60	7.00e-10	57.80
IUUC-Gma-042654	Glycine max	66.75	2.00e-140	491.00
IUUC-Mtr-058623	Medicago truncatula	64.56	6.00e-138	483.00
IUUC-Oba-075552	Oryza barthii	55.15	6.00e-113	399.00
IUUC-Ogl-077345	Oryza glaberrima	55.15	7.00e-113	399.00
IUUC-Ogu-078334	Oryza glumaepatula	55.15	6.00e-113	399.00
IUUC-Oin-079600	Oryza indica	54.87	2.00e-112	398.00
IUUC-Olo-080918	Oryza longistaminata	54.74	1.00e-113	401.00
IUUC-Ome-081986	Oryza meridionalis	55.43	6.00e-113	399.00
IUUC-Oni-082430	Oryza nivara	54.21	3.00e-90	324.00
IUUC-Opu-083902	Oryza punctata	53.76	4.00e-104	370.00
IUUC-Oru-084937	Oryza rufipogon	54.21	3.00e-90	324.00
IUUC-Osa-085881	Oryza sativa	54.87	2.00e-112	398.00
IUUC-Ppa-095590	Physcomitrella patens	46.47	2.00e-65	242.00
IUUC-Pop-099736	Populus trichocarpa	66.84	5.00e-140	489.00
IUUC-Ppe-101362	Prunus persica	65.33	2.00e-133	468.00
IUUC-Smo-108754	Selaginella moellendorffii	45.19	8.00e-62	229.00
IUUC-Stu-112065	Solanum tuberosum	96.09	0.00e+00	707.00
IUUC-Tca-121608	Theobroma cacao	68.81	6.00e-146	509.00
IUUC-Tae-124657	Triticum aestivum	56.70	2.00e-104	371.00
IUUC-Tur-126597	Triticum urartu	59.55	4.00e-88	317.00
IUUC-Uma-129598	Ustilago maydis	22.56	3.00e-08	52.40
IUUC-Vvi-131686	Vitis vinifera	69.03	3.00e-130	457.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence