iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006473

Ensembl Protein ID

fgenesh2_kg.8__979__AT5G50970.1

UniProt Accession

D7MQV6; D7MQV6_ARALL

Genbank Protein ID

EFH40348.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_495163

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__979__AT5G50970.1	fgenesh2_kg.8__979__AT5G50970.1	fgenesh2_kg.8__979__AT5G50970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-12	47.5	444	467

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++ +d  +l sGs D +i+v+D+r
   Q: 444  SWsPDgLYLTSGSVDPVIHVFDIR 467
           59999899**************76 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSELCTNPKK PKLKEDDEDE EANVSCKEEQ EEVLVALVEH RSNEIERLNH HISNYQNKLV 60
EAERSLQNSK AKLAQLRGVS VPSISAKKDN KPLKTLRNVN VSEDYASPSP SKTLKPCDSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAACCAAT CCACCCACAA GTTTTGGAAT CAGAAATGAG TGAGCTTTGT ACGAACCCTA 60
AGAAACCCAA ACTCAAAGAA GATGACGAAG ACGAAGAAGC TAATGTCTCT TGCAAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_495163

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	56.57	3.00e-132	464.00
IUUC-Atr-002878	Amborella trichopoda	61.03	8.00e-132	462.00
IUUC-Ath-006806	Arabidopsis thaliana	95.90	0.00e+00	902.00
IUUC-Bdi-014216	Brachypodium distachyon	60.92	1.00e-129	455.00
IUUC-Bol-015463	Brassica oleracea	79.25	0.00e+00	818.00
IUUC-Bra-017074	Brassica rapa	78.40	0.00e+00	845.00
IUUC-Gga-040760	Gallus gallus	31.03	9.00e-08	49.30
IUUC-Gma-042665	Glycine max	59.48	0.00e+00	628.00
IUUC-Hvu-047292	Hordeum vulgare	64.31	3.00e-112	397.00
IUUC-Lpe-051627	Leersia perrieri	49.42	8.00e-138	483.00
IUUC-Mtr-058789	Medicago truncatula	61.01	9.00e-162	562.00
IUUC-Mac-065472	Musa acuminata	55.30	3.00e-162	564.00
IUUC-Oba-074995	Oryza barthii	60.64	8.00e-135	473.00
IUUC-Obr-076006	Oryza brachyantha	51.72	7.00e-141	493.00
IUUC-Ogl-077176	Oryza glaberrima	51.32	1.00e-140	492.00
IUUC-Ogu-078267	Oryza glumaepatula	51.32	1.00e-140	492.00
IUUC-Oin-079742	Oryza indica	63.20	4.00e-137	480.00
IUUC-Olo-080890	Oryza longistaminata	60.92	3.00e-125	441.00
IUUC-Ome-081454	Oryza meridionalis	51.32	1.00e-140	492.00
IUUC-Oni-083009	Oryza nivara	49.51	4.00e-137	481.00
IUUC-Opu-083781	Oryza punctata	63.71	2.00e-135	474.00
IUUC-Oru-084517	Oryza rufipogon	49.51	4.00e-137	481.00
IUUC-Osa-085484	Oryza sativa	63.20	4.00e-137	480.00
IUUC-Ppa-095859	Physcomitrella patens	43.58	2.00e-111	395.00
IUUC-Pop-099647	Populus trichocarpa	61.39	4.00e-179	620.00
IUUC-Ppe-101833	Prunus persica	58.06	3.00e-175	607.00
IUUC-Smo-109600	Selaginella moellendorffii	36.90	9.00e-43	166.00
IUUC-Sit-109887	Setaria italica	62.78	3.00e-135	474.00
IUUC-Sly-111601	Solanum lycopersicum	51.21	1.00e-160	559.00
IUUC-Stu-112708	Solanum tuberosum	60.10	7.00e-146	509.00
IUUC-Sbi-114727	Sorghum bicolor	61.93	4.00e-133	467.00
IUUC-Tca-121644	Theobroma cacao	62.50	8.00e-172	596.00
IUUC-Tae-125240	Triticum aestivum	62.57	4.00e-139	487.00
IUUC-Vvi-131460	Vitis vinifera	60.55	3.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence