iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	24.86	1.00e-03	42.70	IUUC-Hsa-046898

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Functional Description
(View)

Probable inactive ADP-ribosyltransferase that functions with RCD1 to regulate oxidative stress, hormonal and developmental responses. May regulate some stress-responsive genes. Seems to play a smaller developmental role than R.

Protein Sequence
(Fasta)

MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG 60
ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI DLPDHILCDI RNDLEAKRAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACCGGGTCA GAATTGATAG GTGACGGTCC AGTTAGAATT GGGCTTTGAC GTAAAAAAAA 60
AAAATGTGTA ACTTTGTTCT TTGCCTAAAC GATTGGCTTT GTGTCCAAGA GTAGACCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0346--Stress response

Interpro

IPR012317--Poly(ADP-ribose)pol_cat_dom
IPR022003--RST
IPR004170--WWE-dom

PROSITE

PS51059--PARP_CATALYTIC
PS50918--WWE

Pfam

PF00644--PARP
PF12174--RST

Gene Ontology

GO:0016363--C:nuclear matrix
GO:0003950--F:NAD+ ADP-ribosyltransferase activity
GO:0009793--P:embryo development ending in seed dormancy
GO:0010102--P:lateral root morphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0006970--P:response to osmotic stress
GO:0006979--P:response to oxidative stress
GO:0009651--P:response to salt stress

KEGG

ath:AT2G35510

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002292	Ailuropoda melanoleuca	25.13	2.00e-05	42.70
IUUC-Apl-003207	Anas platyrhynchos	22.99	1.00e-03	37.00
IUUC-Aca-004986	Anolis carolinensis	23.93	1.00e-03	37.00
IUUC-Aly-006570	Arabidopsis lyrata	91.59	0.00e+00	862.00
IUUC-Ame-010744	Astyanax mexicanus	39.39	7.90e-02	30.80
IUUC-Bta-013000	Bos taurus	24.85	7.00e-05	40.80
IUUC-Bdi-014530	Brachypodium distachyon	29.08	4.00e-43	169.00
IUUC-Bol-015256	Brassica oleracea	64.33	8.00e-163	566.00
IUUC-Bra-017321	Brassica rapa	64.77	4.00e-165	573.00
IUUC-Cja-019771	Callithrix jacchus	26.47	8.00e-05	40.40
IUUC-Cfa-020993	Canis familiaris	22.73	3.00e-06	45.40
IUUC-Cpo-021512	Cavia porcellus	24.85	6.00e-05	40.80
IUUC-Csa-023879	Chlorocebus sabaeus	24.14	2.00e-05	42.70
IUUC-Cho-024502	Choloepus hoffmanni	25.00	4.00e-03	35.00
IUUC-Dre-027641	Danio rerio	29.36	2.00e-04	39.70
IUUC-Dno-029697	Dasypus novemcinctus	24.79	3.00e-04	38.90
IUUC-Ete-032790	Echinops telfairi	25.90	2.00e-04	38.90
IUUC-Eca-034111	Equus caballus	23.81	5.00e-05	41.20
IUUC-Eeu-035016	Erinaceus europaeus	29.41	1.00e-02	33.50
IUUC-Fca-036573	Felis catus	24.86	2.00e-05	42.40
IUUC-Fal-036975	Ficedula albicollis	19.92	2.00e-04	39.30
IUUC-Gmo-039025	Gadus morhua	21.23	1.00e-02	33.50
IUUC-Gga-040569	Gallus gallus	22.83	5.00e-05	41.20
IUUC-Gac-041472	Gasterosteus aculeatus	48.48	5.00e-03	34.70
IUUC-Ggo-045088	Gorilla gorilla	25.45	5.00e-05	41.20
IUUC-Hsa-046898	Homo sapiens	25.45	6.00e-05	41.20
IUUC-Itr-049047	Ictidomys tridecemlineatus	25.45	5.00e-05	41.20
IUUC-Lch-049457	Latimeria chalumnae	22.53	3.00e-04	38.90
IUUC-Loc-051755	Lepisosteus oculatus	19.82	2.00e-04	39.70
IUUC-Laf-053383	Loxodonta africana	25.45	4.00e-05	41.60
IUUC-Mcc-055141	Macaca mulatta	25.45	7.00e-05	40.80
IUUC-Meu-056178	Macropus eugenii	23.24	6.00e-05	40.80
IUUC-Mmr-061650	Microcebus murinus	25.15	6.00e-05	40.80
IUUC-Mdo-061843	Monodelphis domestica	21.61	2.00e-05	42.40
IUUC-Mmu-063312	Mus musculus	26.47	1.00e-04	40.40
IUUC-Mac-065114	Musa acuminata	41.67	1.00e-34	140.00
IUUC-Mpu-066436	Mustela putorius furo	24.86	1.00e-05	43.10
IUUC-Mlu-067990	Myotis lucifugus	26.47	1.00e-04	40.40
IUUC-Nle-070071	Nomascus leucogenys	24.86	2.00e-05	42.70
IUUC-Opr-070459	Ochotona princeps	24.85	6.00e-05	40.80
IUUC-Ont-072362	Oreochromis niloticus	28.70	2.00e-03	36.20
IUUC-Ocu-074786	Oryctolagus cuniculus	25.45	4.00e-05	41.60
IUUC-Ogu-078498	Oryza glumaepatula	30.48	6.00e-48	184.00
IUUC-Oin-079090	Oryza indica	30.73	8.00e-49	187.00
IUUC-Oni-082246	Oryza nivara	30.73	7.00e-49	187.00
IUUC-Opu-084003	Oryza punctata	39.64	1.00e-31	130.00
IUUC-Oru-084978	Oryza rufipogon	30.83	4.00e-48	185.00
IUUC-Osa-086125	Oryza sativa	30.83	4.00e-48	185.00
IUUC-Ola-086821	Oryzias latipes	45.45	7.00e-03	34.30
IUUC-Oga-088690	Otolemur garnettii	23.78	2.00e-05	42.40
IUUC-Oar-090433	Ovis aries	24.85	1.00e-04	40.40
IUUC-Ptr-091671	Pan troglodytes	25.15	6.00e-05	40.80
IUUC-Pan-092070	Papio anubis	25.45	7.00e-05	40.80
IUUC-Psi-093329	Pelodiscus sinensis	23.66	7.00e-05	40.80
IUUC-Pfo-096179	Poecilia formosa	28.70	3.00e-03	35.00
IUUC-Pab-097742	Pongo abelii	24.86	2.00e-05	42.70
IUUC-Pop-098936	Populus trichocarpa	31.19	1.00e-27	116.00
IUUC-Pca-100658	Procavia capensis	24.85	8.00e-05	40.40
IUUC-Pva-103056	Pteropus vampyrus	25.45	3.00e-05	42.00
IUUC-Rno-105589	Rattus norvegicus	26.47	7.00e-05	40.80
IUUC-Sha-107203	Sarcophilus harrisii	21.61	2.00e-05	43.10
IUUC-Sit-110659	Setaria italica	29.41	7.00e-45	174.00
IUUC-Sly-111820	Solanum lycopersicum	26.12	1.00e-41	163.00
IUUC-Sar-113524	Sorex araneus	23.64	1.00e-04	40.40
IUUC-Sbi-113865	Sorghum bicolor	28.53	1.00e-41	164.00
IUUC-Ssc-115603	Sus scrofa	25.45	3.00e-05	42.00
IUUC-Tgu-116473	Taeniopygia guttata	19.92	3.00e-04	38.90
IUUC-Tru-117592	Takifugu rubripes	28.70	1.00e-03	36.60
IUUC-Tsy-118936	Tarsius syrichta	25.45	4.00e-05	41.60
IUUC-Tni-120472	Tetraodon nigroviridis	29.57	6.00e-04	37.70
IUUC-Tbe-127303	Tupaia belangeri	25.45	4.00e-05	41.60
IUUC-Ttr-128870	Tursiops truncatus	22.70	2.00e-04	39.30
IUUC-Vpa-130087	Vicugna pacos	25.74	2.00e-04	39.30
IUUC-Xtr-132149	Xenopus tropicalis	24.81	4.00e-03	34.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence