iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099684

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transport inhibitor response family protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTR_0017s08860g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s08860	POPTR_0017s08860.1	POPTR_0017s08860.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	76.00	0.00e+00	902.00	IUUC-Ath-007170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNYFPDEVLE HIFDFVTSQR DRNSVSQVCK PWYKIESSSR QKVFVGNCYA ISPQRVIERF 60
PGLKSITLKG KPHFADFNLV PNDWGGFVYP WIEAFARNSV GLEELKLKRM IISDECLELI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGAGATGA AAAATCTGAA CTTGAAGTAG TAGTACGTGG TGGTCTCCCT CTCTATAACA 60
TCATCTTCTT TGTTTTTCTG TTACTGTTAT TGTTATCTTG GGATTTTTGA TTTAGTTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0000822--F:inositol hexakisphosphate binding
GO:0009734--P:auxin-activated signaling pathway

KEGG

pop:POPTR_0017s08860g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000251	Aegilops tauschii	62.89	0.00e+00	711.00
IUUC-Atr-002877	Amborella trichopoda	65.51	0.00e+00	794.00
IUUC-Aly-005635	Arabidopsis lyrata	76.35	0.00e+00	921.00
IUUC-Ath-007170	Arabidopsis thaliana	76.00	0.00e+00	902.00
IUUC-Bdi-014864	Brachypodium distachyon	66.09	0.00e+00	773.00
IUUC-Bol-015221	Brassica oleracea	74.96	0.00e+00	900.00
IUUC-Bra-017679	Brassica rapa	75.04	0.00e+00	900.00
IUUC-Gma-043882	Glycine max	76.71	0.00e+00	917.00
IUUC-Hvu-047360	Hordeum vulgare	66.20	0.00e+00	771.00
IUUC-Lpe-051628	Leersia perrieri	66.96	0.00e+00	780.00
IUUC-Mtr-058259	Medicago truncatula	74.61	0.00e+00	912.00
IUUC-Mac-064750	Musa acuminata	68.00	0.00e+00	788.00
IUUC-Oba-075353	Oryza barthii	67.13	0.00e+00	781.00
IUUC-Obr-076616	Oryza brachyantha	66.96	0.00e+00	781.00
IUUC-Ogl-077636	Oryza glaberrima	67.13	0.00e+00	782.00
IUUC-Ogu-078337	Oryza glumaepatula	67.13	0.00e+00	780.00
IUUC-Oin-079789	Oryza indica	67.13	0.00e+00	782.00
IUUC-Olo-080406	Oryza longistaminata	68.16	0.00e+00	745.00
IUUC-Ome-081861	Oryza meridionalis	67.13	0.00e+00	781.00
IUUC-Oni-082544	Oryza nivara	67.13	0.00e+00	780.00
IUUC-Opu-083530	Oryza punctata	67.13	0.00e+00	779.00
IUUC-Oru-084887	Oryza rufipogon	67.13	0.00e+00	777.00
IUUC-Osa-085607	Oryza sativa	67.13	0.00e+00	781.00
IUUC-Ppa-095626	Physcomitrella patens	53.59	3.00e-178	617.00
IUUC-Ppe-101640	Prunus persica	81.12	0.00e+00	983.00
IUUC-Ptt-103834	Puccinia triticina	27.91	8.10e-02	32.00
IUUC-Smo-108880	Selaginella moellendorffii	52.23	2.00e-179	622.00
IUUC-Sit-110014	Setaria italica	67.13	0.00e+00	766.00
IUUC-Sbi-114607	Sorghum bicolor	66.72	0.00e+00	784.00
IUUC-Tca-121184	Theobroma cacao	80.42	0.00e+00	920.00
IUUC-Tae-124534	Triticum aestivum	66.20	0.00e+00	775.00
IUUC-Tur-126235	Triticum urartu	66.20	0.00e+00	772.00
IUUC-Vvi-131655	Vitis vinifera	80.07	0.00e+00	944.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence