iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042673

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000849

Gene Name

LOC100786235; GLYMA_16G170300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA16G28630	GLYMA16G28630.1	GLYMA16G28630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.30e-29	101.3	13	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp+ f+CpIs+++Mr Pv l++G+tydr+sI+ wl+sg+ tcP t+q l ++d++Pnltl+rli  w+ ++ss
   Q: 13   VPSLFRCPISMDVMRSPVSLCTGVTYDRASIQHWLDSGHDTCPATMQVLPSKDFIPNLTLHRLIRLWLLSSSS 85
           89*****************************************************************988775 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKVRDQKLY VTVPSLFRCP ISMDVMRSPV SLCTGVTYDR ASIQHWLDSG HDTCPATMQV 60
LPSKDFIPNL TLHRLIRLWL LSSSSSSSAE PPSPSSSADH LRPLLRQIQT SDDNVPGILS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAAGG TAAGAGATCA GAAGCTATAC GTCACCGTTC CGAGTCTCTT TCGGTGCCCA 60
ATCTCCATGG ACGTGATGCG CTCTCCCGTA AGCCTCTGCA CCGGCGTCAC ATACGATCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100786235

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050910	Leersia perrieri	75.34	1.00e-29	124.00
IUUC-Obr-076177	Oryza brachyantha	73.97	3.00e-29	122.00
IUUC-Oni-082297	Oryza nivara	77.61	7.00e-28	118.00
IUUC-Opu-083968	Oryza punctata	32.74	2.00e-36	146.00
IUUC-Oru-084478	Oryza rufipogon	77.61	7.00e-28	118.00
IUUC-Osa-085354	Oryza sativa	77.61	7.00e-28	118.00
IUUC-Pop-099973	Populus trichocarpa	47.84	3.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence