iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058262

Ensembl Protein ID

KEH35471

UniProt Accession

A0A072V1A7; A0A072V1A7_MEDTR

Genbank Protein ID

KEH35471.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g491920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g491920	KEH35471	KEH35471

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-28	97.6	350	386
UBD/Beta-Prp	6.40e-50	171.5	208	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           gH ++v +l++s  ++l+s+s D+t+++W + ++++l
   Q: 350  GHRSEVLDLSWSKkNYLLSSSTDKTVRLWQVNRDHCL 386
           8**********5569****************999987 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkl.......lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.............................. 82
            +++s+ ++g+r +++kv + +++ +        + ++ he+++ ++kfspdg++l+tg+eD++++vw +                               
   Q: 208  RKEGSYAVSGCRLQKVKVRQCRKKMKelsslylRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVeedrcneihipeidpssiyftvnnlsqltp 308
           56788888888888888888888766888888556668888888888888888888888888888888444455666666777777788888888888888 PP
   S: 83   ................................tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.n 150
                                             k++h ++gh ++vl+ls+s+ +++l+s s d+t+r+w+++ + cle     h+  v+c++++p + +
   Q: 309  lfmdkeklgqlksmrktadsacvvfppkifrlLEKPLHEFRGHRSEVLDLSWSK-KNYLLSSSTDKTVRLWQVNRDHCLE--VFSHSNYVTCIQFNPVDeD 406
           888888888888888888888888888888888889999999999999999998.8889999999999999999999998..4457778899999998889 PP
   S: 151  llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           +++sGs D++vr+W ++  ++  ++t    d v+ + ++++g+  + gsl g   ++ ++
   Q: 407  YFISGSIDGKVRIWTIPDSQV-VDWTD-VRDIVTAVCYRPDGQGGIVGSLEGNCWFYKIS 464
           999999999999998865555.46766.77888888888888888888888877777776 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGSFSGEEDC RFFDAEEDVL SIRDVNSDDD DKGVSVSVDF DYEVWIRSPK SVRERRRRFM 60
KSMGMSVDEI VVENSLDFEK EDIMEIGKDS NGSVEEFSSC RLSLSCCSSV SSSEEFGLVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCACCT TTTACTACTA CTATTGCTAT TACCTTTTCT TTCTCGTTTG TTCCATTGAA 60
AACCAACGGA TTTTCCTCCT CAATCTCTCT CTCTCTCTCT CTTCCTTTTC ACTACAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_3g491920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000337	Aegilops tauschii	52.84	8.00e-144	503.00
IUUC-Aly-005587	Arabidopsis lyrata	47.45	4.00e-168	584.00
IUUC-Bdi-014709	Brachypodium distachyon	48.53	4.00e-146	511.00
IUUC-Gma-043517	Glycine max	70.05	0.00e+00	889.00
IUUC-Hvu-047828	Hordeum vulgare	49.35	1.00e-143	502.00
IUUC-Lpe-051594	Leersia perrieri	49.60	4.00e-110	391.00
IUUC-Mac-064863	Musa acuminata	45.82	2.00e-163	568.00
IUUC-Oba-075132	Oryza barthii	48.09	5.00e-142	497.00
IUUC-Olo-080838	Oryza longistaminata	52.96	1.00e-130	459.00
IUUC-Opu-083689	Oryza punctata	48.27	9.00e-142	496.00
IUUC-Osa-085283	Oryza sativa	52.95	1.00e-130	460.00
IUUC-Sly-111558	Solanum lycopersicum	49.45	2.00e-177	615.00
IUUC-Stu-112511	Solanum tuberosum	50.74	0.00e+00	681.00
IUUC-Tae-124708	Triticum aestivum	52.65	3.00e-143	501.00
IUUC-Tur-126854	Triticum urartu	52.94	1.00e-144	506.00
IUUC-Tme-126882	Tuber melanosporum	33.41	2.00e-62	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence